| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1161 |
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| Symbol | |
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| ID | 8567807 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | + |
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| Start bp | 1348626 |
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| End bp | 1351433 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003290439 |
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| Protein GI | 268316720 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.880371 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGGTCT GGGGTGGTAT CGCTTCCGCG TTTGCCCAGA CCGGCAAGAT CGCAGGCTAC
GTTCGGGATG CGGCCACGGG TGATCCGCTA CCCGGCGTGA ATGTGGTAAT CGTCGGGACC
ACCCTGGGAA GCGCCACGGA CATTGATGGC TACTATGTCA TTCTCAATGT GCCGCCCGGT
GTTTATGAAG TGCGGGCTAC GTTCGTCGGC TACCAGCCCG TTACGAAGAC CGATGTGGTG
GTCAACTCGG GGCGCACGAC GGAGCTCAAC TTTGAGCTGA CCGAAGCCCC TATGCAGATC
GGCGAAGAGA TCGTCGTGGT GGCCGAACGG CCGGTGGTCG ATCCGGAACG GGTAGCTTCG
AGCGAGATTT TCCGTCCGGC CGACGTCGCG GTGAGCACGC CGGGCATTTA CGACTTGGCG
GACGTGTTCG ACCTGACGGT GGATGTGTCG GACGGTCACT TCCGCGGTGG GCGCACGGGC
GAAGAGCTTT ACCTGCTGAA CGGGATCAAC ATCGTCAATC CGCTGAACAA CAGCCGGGCT
TTTCAGCCAC CGACGATCGC GTTGGAGGAG GTTGAAATCA TCACCGGTGG ATTCCCGGCC
GAATATGGCA ATGCGCAGAG CGGTGTGGTC AACATCGCGC TTCGGGAAGG CCCCAGCCAG
GAGTGGAGCG GCAACGTGGT CGTGCGACTG CGGGCACCGG GGCGCAAGCA CTTCGGACCG
AGTGTGTTCG ATTCGACGGC CAACCCGTAC CTGCAGGCTT TCAACAGCCC TGAGGACTGG
ATGGGGGACA GTGGTGAGGG TTCTTACTAC GGCTTTATTG GATATGGCTT CAATCCGCCT
GATAGTCTTA CAGGTGGGCG TATTGCATAC GGTATGTGGC AGCAGGCCCG CAAAGAGCTG
GGGCGTAACT ATGGTAAGAT GTGGGACAGC GACATGCAGG TGGCGCTGGG TGGGCCGCTG
ACCTCCTGGG CGCGCATTTT CCTGTCGGGT CGTTTTCAGA GTGAGGAATG GGTGCTGCCC
TACGCACATC CGCTGGAGAC CCGCCAGCTG CTCGGTACGG TCACCTTCGA TGTGGGCAGC
AACAAGAGCC TGCGACTGGC CGGGGCCTAC AATACCAACG AGGCCATCAG TGCCAGCAGC
AGCTTCTGGA ACTGGCTCTG GGATCGTGCA ATCGGGGTGG CCCCGCAAAA AGAGACGGCC
TATGCGCTGG GGCTTCGGTT TTCCCATGCA TTGTCGGGCC GGTCTTTCTA TGAAGTGAAC
CTGTCCACGC TCTGGACGCG TTTCCGGCAA GGTGCTGCCG TGCTCGATCC GAATCGCTTC
CGCGAAGACG CCGCCGACGC AGGGGTCTGG CGCTATTACA ACCCGCCGGA TCAGTTCCGC
GTGGGCTACA TGGAGAATGA CTTTCTTGAT GAGCGGACGC GGACCTGGAG TCTGGATGCC
GCCTACAGCA ACCAGTTGAC CAGCAATCAC CTCCTGAAAG CGGGCGTGCA GGCACGCCTG
TACGAGCTGG ACGTGCGCAA CCGGCGCAAC CTTTCGAGTC CCTCGGACGC GCAGGACGAA
TTCTTCAAGA GCAATCCGGT CGATCTGGGC ATTTACGTCC AGGACAAGAT GGAATTCGGT
GGCCTGATCG CCAACGTCGG GCTGCGCCTG GACCTGTACA ACCAGAACAT AGACTACTAT
ACGAATCAGT TCAATCCCTT CCTCAATCCG AACTACGATC CCACGCAACC GCCGGTAGGC
GAAAATGTCT ATCTCAGTCC GGACCTGGCG GACAAGAAAC CCACCCCATG GGTTTACGGG
CTGCAGCCGC GTCTGGGCAT CTCGTTCCCC GTCTTTGTGC AGACCGTGTT CTATTTGAAC
TACGGGGCGT TTTTCCAGCG CCCACCTTTT GAGCGGTTGC AGGTGAAGCG CTTGCAGCAC
GCCAATCAGA CGACCATCTT CCGGATGGGC AATCCGCGTC TGGAGCCCGA GCGCACGAAC
ATGTACGAAG TGGGTGTGGC CCAGCAGCTT CCGTGGGATT TCGTGCTCGA CGTTTCGGGC
TACTACAAGG ACGTGAAGAA TCTGGTGCAG CTCGCCTACT TCCGTCAGGG TGAAGAGCTG
CCCTATGAAA CCTATATCAA CCGGGATTAC GCCGATATCC GCGGCTTCCG AATTTCCCTC
AACCGTAGAA CTGGATGGTG GCGGGCTTCG GTGCGCTACC ACTACAGCGT AGCGACCGGT
AAAACGTCGT CGTCGTTCGA CGCACCGCCC ACGTACACGC AGCTGGAAAA TGGCGAGGTG
GCCGTTTCCG GTGGGGTGCT CAACCTGAAC GACGTGCTGC TCGACTTCGA CCGCACGCAC
AACCTGCTGG CTCAGCTCAC GGTGAGCACG CCCGGGGACT TCGGCTTCCG GATCGGGGAT
GTGAATGTGC TGGGCAACCT TTCAATCTCC CTGAAAAGCC GGATCCAGAG CGGCCGACCC
TACACCTACG TCGGGCCCAG TGGCGGGTTG GAAGGGGTGG TCTTGATGAA TCGGCGGAGT
CCGACGGAGT ACCAGACCGA CCTCAAAATT ACGCGGCGGT TTAAGGAATT CGGGGATCGG
GTGGACTTCG TGGCCTTCGT CGAAGTGATC AACCTGTTCA ACAACCGGCA TTTTGATTAC
GACTACGTCT TCAGGGATCC ACTGCTGATT CGTTCTTATG AGGGCGACGC TGATGAACCC
ATTGAACTGA TCATTCCACC CAACGGAAGC TGGACGGCGA ATCAGGAGTG GCGCATTTAC
GACAACCTGC CGCGGTCCTT CTACTTCGGG GTTTCTCTGG AATTCTAA
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| Protein sequence | MLVWGGIASA FAQTGKIAGY VRDAATGDPL PGVNVVIVGT TLGSATDIDG YYVILNVPPG
VYEVRATFVG YQPVTKTDVV VNSGRTTELN FELTEAPMQI GEEIVVVAER PVVDPERVAS
SEIFRPADVA VSTPGIYDLA DVFDLTVDVS DGHFRGGRTG EELYLLNGIN IVNPLNNSRA
FQPPTIALEE VEIITGGFPA EYGNAQSGVV NIALREGPSQ EWSGNVVVRL RAPGRKHFGP
SVFDSTANPY LQAFNSPEDW MGDSGEGSYY GFIGYGFNPP DSLTGGRIAY GMWQQARKEL
GRNYGKMWDS DMQVALGGPL TSWARIFLSG RFQSEEWVLP YAHPLETRQL LGTVTFDVGS
NKSLRLAGAY NTNEAISASS SFWNWLWDRA IGVAPQKETA YALGLRFSHA LSGRSFYEVN
LSTLWTRFRQ GAAVLDPNRF REDAADAGVW RYYNPPDQFR VGYMENDFLD ERTRTWSLDA
AYSNQLTSNH LLKAGVQARL YELDVRNRRN LSSPSDAQDE FFKSNPVDLG IYVQDKMEFG
GLIANVGLRL DLYNQNIDYY TNQFNPFLNP NYDPTQPPVG ENVYLSPDLA DKKPTPWVYG
LQPRLGISFP VFVQTVFYLN YGAFFQRPPF ERLQVKRLQH ANQTTIFRMG NPRLEPERTN
MYEVGVAQQL PWDFVLDVSG YYKDVKNLVQ LAYFRQGEEL PYETYINRDY ADIRGFRISL
NRRTGWWRAS VRYHYSVATG KTSSSFDAPP TYTQLENGEV AVSGGVLNLN DVLLDFDRTH
NLLAQLTVST PGDFGFRIGD VNVLGNLSIS LKSRIQSGRP YTYVGPSGGL EGVVLMNRRS
PTEYQTDLKI TRRFKEFGDR VDFVAFVEVI NLFNNRHFDY DYVFRDPLLI RSYEGDADEP
IELIIPPNGS WTANQEWRIY DNLPRSFYFG VSLEF
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