Gene Rmar_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1122 
Symbol 
ID8567768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp1298278 
End bp1298982 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content64% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003290401 
Protein GI268316682 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.752968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGCATT CCTTGCTACG AGAAAACACG GGCGCGCAGA GCGACCGCAT CCGCGTGGTG 
ATTGTCGACG ACCACCCGGC CATTCGGGAG GCGCTCTCGG ACACGATCAA CAGCGCCATG 
GGCATGGAAG TCGTGGGGCA GGCCAGCACG GCCGCCGAGG CGTTCCGCCT GATCGAAAAA 
GAGCGTCCCA CGGTGGCGGT CGTCGACATC TCGCTGGAGG ATGCGCACGG CCTGGATCTG 
GTCCAGAACA TCCGGGCACA GTTCCCCGAA GTGCTGGTTG TCATCTTTTC CATGTACGAC 
GAGAGCGTCT ATGCCGAGCG GGCCATCCGG GCCGGCGCTT CGGGCTACCT GATGAAGAGC 
GAGCCCACAC AGAGTGTCGT GGAGGCCATC CGGGCCGTCG TGCGCGGTGA GGTCTACCTG 
AGCCGACGTA TGGCCTCGCG CATTCTCAGC AAAGTGGCCA TGGGACGGGC ACCGGGGCCC 
GGCTTTGCCA TCGACGAGCT GACCGACCGG GAGATGGCCG TCTTCCAGAT GCTCGGCCAG 
GGCTACACGA TCGACGAAAT CACGGAGCGG CTGAACCTGA GTCGGAAGAC GGTCGAGACC 
TACCGCCGCC GCGCCAAGGA AAAGCTCGGC TTCGACTCAG TGGCCGAATT GCTCCAGTTT 
GCCGTGCAGT GGACGCACGC GCAGGGACGG GGTGGCAAAT TGTGA
 
Protein sequence
MMHSLLRENT GAQSDRIRVV IVDDHPAIRE ALSDTINSAM GMEVVGQAST AAEAFRLIEK 
ERPTVAVVDI SLEDAHGLDL VQNIRAQFPE VLVVIFSMYD ESVYAERAIR AGASGYLMKS 
EPTQSVVEAI RAVVRGEVYL SRRMASRILS KVAMGRAPGP GFAIDELTDR EMAVFQMLGQ 
GYTIDEITER LNLSRKTVET YRRRAKEKLG FDSVAELLQF AVQWTHAQGR GGKL