Gene Rmar_1111 details

Gene Information

• Locus tag: Rmar_1111
• ID: 8567757
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1288695
• End bp: 1290794
• Gene Length: 2100 bp
• Protein Length: 699 aa
• Translation table: 11
• GC content: 64%
• Product: protein of unknown function DUF255
• Protein accession: YP_003290390
• Protein GI: 268316671

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.992934
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGAATC GCCTTCAGTT TGAGAAAAGC CCCTATCTAC AGCAGCACAA GGACGATCCG 
GTCGACTGGT GGCCCTGGTG CGAGGAAGCC TTCGAGAAGG CAAAGGCCGA AGACAAGCCG 
ATCTTTCTGT CGATCGGCTA TGCGGCCTGC CACTGGTGCC ACGTGATGGC GCACGAGTCG 
TTTCAGGATG AAGAGGTCGC CCGTCTGTTG AACGATGCGT TCATCAACAT CAAGGTGGAT 
CGCGAGGAGC GGCCTGACAT CGACCACCTC TACATGACCG TCTGCCAGAT GGTGACGGGG 
CACGGCGGCT GGCCGCTGAC CATCATCATG ACGCCCGACA AAAAGCCGTT CTTTGCGGCC 
ACCTACATCC CGAAGCGGAG TCGCTACGGG CGACCGGGAC TGCTGGAGAT CATCCCGCGT 
ATCAAGGAGG CCTGGCAGCA GCACCGGGAC GAGATCATCG CTTCGGCCGA AAAGCTGACC 
GGCACGCTGC AGAAGGTCAT GTCGTTCGAG GCGCCCAGCC AGATCATCGA TGCGGAATGG 
CTGGAGATCG CCTACCGGCG TCTGGATGAC ATCTTCGACC GGAAACACGG GGGCTTCGGG 
CATGCGCCGA AGTTTCCCAC GCCGCACACG CTGCTGTTTC TGCTGCGCTA CTGGCATCGG 
AGCGGGGAGG CGCACGCGCT GCAGATGGTC GAGCACACGC TGGTGCAAAT GCGCCTGGGC 
GGCATCTACG ATCATGTCGG GTTCGGTTTC CACCGCTATG CGACGGACGA AGCCTGGCGC 
GTGCCGCACT TCGAAAAGAT GCTCTACGAC CAGGCGCTGC TGACGATGGC CTACACCGAA 
GCCTATCAGG CTACCGGCAA CCCGTTCTAC GAGCGCACGG CCCGGGAAAT CCTGACCTAC 
GTGCTGCGCG ATCTGCGCGC GCCGGAAGGC GCTTTCTACA GCTCGGAAGA TGCCGACAGC 
GAAGGCGAGG AGGGGAAGTT TTACGTGTGG ACGGTCGAGG AACTGCGCGA GGTGCTGGGG 
CCGGAGCTGA CGCCGCTGGC CATCGAGCTG TTCAACGTGG ATCCCGAGGG CAACTACGAA 
GAGGAGGCGA CGGGCGAGCG CACCGGCAAA AACATTCTGT ACCTGAGCAA ACCCCCGGAA 
GCCCTGGCTC GCGAACGGGG TTGGACACCG GAAGAACTGG AGGCAAAGCT TGAAGAAATC 
CGGCAACGTC TGTTTGCCTA TCGGGCGCGG CGCGTGCGGC CCGGACGGGA CGAGAAAATC 
CTGACGGACT GGAACGGATT GATGATCGCC GCGCTGGCCC GTGCCGCCCA GGTGTTCGAC 
GAGGTTGCGT ACGTTGAAGC GGCCCGGTCG GCCGCCGACT TCCTGCTGCG CACGATGCAC 
ACGCCTGAAG GCCGCCTGTG GCATCGCTAC CGGGAGGGCG AGGCGGGCAT TCCGGGCATG 
CTCGACGACT ATGCCTTTCT GACCTGGGGA CTGCTGGATC TGTACGAGAC CACGTTTGAA 
ACGTCCTACC TGGAGACAGC GCTGGCGCTG ACCGAGCAGA TGCTGGCCCA TTTCTGGGAT 
CCGCGCGGTG CATTTTACAT GACGCCCGAC GACGGCGAGC CGATGATCGT ACGTCCCCGG 
GAGACCCTGG ACAATGCGTT GCCGTCGGGC AATGCCGTGG CGCTGATGAA CCTGGTGCGG 
CTGGGCCACA TGACCGGACG GACGGCCTAC GAGGAGCACG CCGACGCGAT GATTCGCTTT 
TTCTCGGGAC CGGTCAAACA GCAGCCGCCC ATCTTTACGG GCATGCTGAT CGCCATCGAC 
CTGGCCTTCG GGCCCATCTA CGAGCTGGTG CTGGCGGGTG AACCCGACGA TCCGACGCTC 
CGGGAGATGC TGCGTACGAT TCACCGGCGC TATCTGCCCC GTAAGGTGCT GCTGCTGCGT 
CGGCCCGGTG AAGCCGGCGA GCGGCTCGTC CGGGTGGCGC CGTTCGTGGC CGCCCAGCTA 
CCTGTCGACG GTCGGGCTAC TGCCTACGTG TGCCATGACT ATCGGTGCGA GCAGCCTGTC 
ACCGATCCGG AGGCGCTGGC CCGCCAGCTC GATGCGCTGC AACCTGCCCA GCCGGCCTGA 

 

Protein sequence

MPNRLQFEKS PYLQQHKDDP VDWWPWCEEA FEKAKAEDKP IFLSIGYAAC HWCHVMAHES 
FQDEEVARLL NDAFINIKVD REERPDIDHL YMTVCQMVTG HGGWPLTIIM TPDKKPFFAA 
TYIPKRSRYG RPGLLEIIPR IKEAWQQHRD EIIASAEKLT GTLQKVMSFE APSQIIDAEW 
LEIAYRRLDD IFDRKHGGFG HAPKFPTPHT LLFLLRYWHR SGEAHALQMV EHTLVQMRLG 
GIYDHVGFGF HRYATDEAWR VPHFEKMLYD QALLTMAYTE AYQATGNPFY ERTAREILTY 
VLRDLRAPEG AFYSSEDADS EGEEGKFYVW TVEELREVLG PELTPLAIEL FNVDPEGNYE 
EEATGERTGK NILYLSKPPE ALARERGWTP EELEAKLEEI RQRLFAYRAR RVRPGRDEKI 
LTDWNGLMIA ALARAAQVFD EVAYVEAARS AADFLLRTMH TPEGRLWHRY REGEAGIPGM 
LDDYAFLTWG LLDLYETTFE TSYLETALAL TEQMLAHFWD PRGAFYMTPD DGEPMIVRPR 
ETLDNALPSG NAVALMNLVR LGHMTGRTAY EEHADAMIRF FSGPVKQQPP IFTGMLIAID 
LAFGPIYELV LAGEPDDPTL REMLRTIHRR YLPRKVLLLR RPGEAGERLV RVAPFVAAQL 
PVDGRATAYV CHDYRCEQPV TDPEALARQL DALQPAQPA