| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1106 |
|---|
| Symbol | |
|---|
| ID | 8567752 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1276429 |
|---|
| End bp | 1276959 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | ribosomal protein L10 |
|---|
| Protein accession | YP_003290385 |
|---|
| Protein GI | 268316666 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0567771 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTGA CCAGAGCCCA GAAAGCGGCC ATCCTGGAAG AAATCAGCGC CAAGTTGGAG
TCGGCGCCGG TCGTCTACGT GACGGACTAC ATGGGGCTGA ACGTGGCCCA GATCACCGAC
CTGCGGCGTC GATTCCGGGA GGCCGGCGTG GAATTCAAAG TCGTCAAAAA CACGCTGCTC
CGAATCGCCA TGGAGCAGCG GGGCGGCTAC GATGAGCTGC TGCCGGCGCT GAACGGCCCT
ACGGCGATTG CCGTGGGCGA CGAGCCGGCG GCACCGGCCC GCGTGATCAA GAAGTTTATC
GAAGAACAGG GGGTCGAGTT GCCCCGGCTG AAGGCTGCCT ACATCGATGG GGCTGTCTAC
GGGGCCGACG CGCTCGACAC GCTGGCCGCG CTGAAGTCGA AGGACGAACT GATCGCCGAT
ATCGTCGGCC TGCTGCTGGC ACCCGCCCGC AACGTGGTGG GCGCGCTGCA GGGACCGGGC
CAGACGCTGG CCGCCTGCCT GCAGGCCATC GCCGAAAAAG AAGCCGCATA A
|
|---|
| Protein sequence | MPLTRAQKAA ILEEISAKLE SAPVVYVTDY MGLNVAQITD LRRRFREAGV EFKVVKNTLL
RIAMEQRGGY DELLPALNGP TAIAVGDEPA APARVIKKFI EEQGVELPRL KAAYIDGAVY
GADALDTLAA LKSKDELIAD IVGLLLAPAR NVVGALQGPG QTLAACLQAI AEKEAA
|
|---|
| |