Gene Rmar_1082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_1082 
Symbol 
ID8567723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp1251670 
End bp1252290 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003290362 
Protein GI268316643 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00041216 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGGCCT GGTTCGCATC GCCCTGGGGT GCCCTGTTGA TCTTCGGATT GCGGATCGTC 
GACGTATCGA TGTCGATGAT CCGCATGATT CTGGCCGTAC GCGGCTATCG GGGCCGGGCG 
GCGGTGATCG GCTTTTTCGA GGTGCTCGTC TGGCTGATGG CCGTCGGCCA GGCGCTGCAG 
CATCTGCATT CCATCTGGCA TGTGCTGGGC TACGCGGCCG GATTTGCGAC GGGCAACTAT 
GTGGGCGTGT GGCTGGAGGA GCGGTTTGCC ATCGGGCTGC GGGTGGTGCG GGCTATTTTC 
CGGAATGGTA CGGAGCGTCG CGGGGCGCTG GCAGCCCAGC TGCTGCGTGA GCGTGGCTTT 
GGCGTGACGG AAGTGCAGGG GCGCGGCCGC GAAGATGTGG TCGAGATCCT GGATCTGATC 
GTCGAGCGAC GGCACGTGCC GGAAGTGGTG CAGCTGCTTC GCCAGGTGGA CCCGAACGTA 
TTCATCAGTA TCGAGGAAGT ACGCGCCATT CAGGGGGGCT ATGTGCGGCC GGGTGGCCGC 
AAACTTCCCT TCCTGACGCG CCTTCAGACG CTGTCCTCCC GCTCGCGGAT GCTGCTGGGC 
TGGCTGGTTC GGCGCCGCTG A
 
Protein sequence
MEAWFASPWG ALLIFGLRIV DVSMSMIRMI LAVRGYRGRA AVIGFFEVLV WLMAVGQALQ 
HLHSIWHVLG YAAGFATGNY VGVWLEERFA IGLRVVRAIF RNGTERRGAL AAQLLRERGF 
GVTEVQGRGR EDVVEILDLI VERRHVPEVV QLLRQVDPNV FISIEEVRAI QGGYVRPGGR 
KLPFLTRLQT LSSRSRMLLG WLVRRR