Gene Rmar_1063 details

Gene Information

• Locus tag: Rmar_1063
• ID: 8567704
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: -
• Start bp: 1213477
• End bp: 1215468
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 71%
• Product: 5-oxoprolinase (ATP-hydrolyzing)
• Protein accession: YP_003290343
• Protein GI: 268316624

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.39661
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGCATCC GCGTAGGTAT CGACATCGGA GGGACCTTTA CGGACTTTGT CGTTTTCGAC 
GAAACGGACG GGCGCCTGAC TACCTTCAAG ATCTTCTCCA CGCCGGACGA TCCGGCGCGT 
GCCGTGCTCG AAGGCCTGCA GCAGGTGCCG GCGGCCGCAC GCCAGATCGT GCACGGCTCG 
ACCGTCGCCA CGAACGCCCT GCTGGAACGC AAAGGCGCGC GCACGGCCTT CGTCACCACG 
GCGGGCTTTC GGGACCTGCT ATATATCGGC CGTCAGAACC GGGCCGAGTT GTACGATCTG 
GCCGCCCGAC GGCCCGAACC GCTCGTGCCA CGCACGCTGT GCTTTGAAGT GCCGGAACGC 
GTGGGCCCCG ACGGATCGGT GCTTCAACCG CTGGACGAGA CGGCCATTCC GCCGCTGATC 
GAGGCGCTTC GGTCGGCCCG CGTGGAGTCG GTCGCCGTCT GTCTGCTTTT TTCTTTTGCC 
CACCCGGACC ACGAGCAACG GCTGGCGCGC GCACTGCGAG AGGCCGGCTT CGTGGTGGCG 
GCCTCCAGCG ACATCCTGCC CGCTTTCCGG GAGTACGAGC GGGCCAGCAC CACGACGGCC 
AGTGCCTACG TGGCCCCCGT GCTGGATCGT TACCTCGGCC GCCTCGAAGC CGCGCTGGGC 
GGCACGCTGC GCGTGATGCA GTCCAGCGGC GGCCTGATTC ATGCCCGCGA GGCCCGCGCC 
CAGGCCGTCC GCTGCGTGCT CTCGGGACCG GCCGGCGGCC TGATCGGCGC CCGCTTCGTG 
GCGGGACTGT CCGGCACCCG CCACCTGATC ACGTTCGACA TGGGCGGCAC GTCCACGGAC 
GTGGCGCTGG TGCCCGACGC CCTGCCCCTC ACCACCGAAG GTACCATCGG CGGGCTTCCC 
ATCGGGATCC CGCTGCTCGA CATCCACACG GTCGGAGCCG GGGGCGGCTC CATTGCGCGC 
GTCGATCCCG GCGGCGCCCT GCGCGTGGGA CCGGAAAGCG CCGGTGCCGA TCCCGGTCCG 
GTCTGTTACG GACGCGGCGG CATCGAACCC ACCGTGACCG ACGCCCACCT GGTGCTCGGC 
CGCCTGCGGC CGGATGCTTT TCTCGGCGGC CGCCATCGGC TGGACGCCAA AGCTGCCGAG 
GAGGCCCTGA CGCGACTGGC CCGAACGCTG CGCCTGGACG TACCCCCCGG CCTGACGCCC 
GCTCAGGCGG CTGCCCGGGG CGTCGTGGCG GTGGCCGAAG CCCACATGGC CCGGGCGCTC 
CGCGTGATCT CGGTCGAGCG CGGCTACGAC CCGCGCGATT TCGTGCTCGT CTCGTTCGGC 
GGCGCCGGCG GCCTGCACGC GGCCACGCTG GCCCGGGCGC TGGGCATTCG CCGCGTGCTC 
GTACCCGCCC AGGCTTCGGT GCTTTCGGCG CTGGGCATGC TGGCCGCCGA CGTGGTGCGC 
GACTATGTCC GGACCGTCAT GCTCCCGGGC ACCACGTCGG CGGAAGAACT GCGTCGGCGT 
CTCGATCCGC TGGTCCGCCA GGGACGCGAG GAGCTACGCG CCGAAGGCTT TGCGTCGGGT 
CAGATCCGGA TCGAACGCCT GCTCGACGTC CGCTACCCCG GCCAGAGCTA CGAACTGACC 
GTGCCCTTCG GCCGCGGCTG GATCAGGGCC TTCCACCGAC TGCACCGGCG GCGCTACGGC 
TATGCCACGC CGGACCTCGT GCCCGAGATC GTCAACCTGC GCGTGCGGGC TACCGGACCG 
ATCGCGCCGC CCGCGCTCCC GACGGTCGAG GCGGGCGATC CCGTTCCGCC CTCCGAAGCC 
CTGCTGGACA GGACGCCGGT CGTGCTCGAG ACGAGCCGGG CGGACGTCCC CTTCTTCGAT 
GCCACCCGCC TGCGGGCCGG CAACCGACTG CTCGGTCCCG CCGTGCTCGT GCGCCCCGAT 
ACGACCATTT ACCTGCCCCC GGAAACCACC GCCCACGTTG ACCGCTTCGG CCATGTCTGG 
ATCGATACCT GA 

 

Protein sequence

MSIRVGIDIG GTFTDFVVFD ETDGRLTTFK IFSTPDDPAR AVLEGLQQVP AAARQIVHGS 
TVATNALLER KGARTAFVTT AGFRDLLYIG RQNRAELYDL AARRPEPLVP RTLCFEVPER 
VGPDGSVLQP LDETAIPPLI EALRSARVES VAVCLLFSFA HPDHEQRLAR ALREAGFVVA 
ASSDILPAFR EYERASTTTA SAYVAPVLDR YLGRLEAALG GTLRVMQSSG GLIHAREARA 
QAVRCVLSGP AGGLIGARFV AGLSGTRHLI TFDMGGTSTD VALVPDALPL TTEGTIGGLP 
IGIPLLDIHT VGAGGGSIAR VDPGGALRVG PESAGADPGP VCYGRGGIEP TVTDAHLVLG 
RLRPDAFLGG RHRLDAKAAE EALTRLARTL RLDVPPGLTP AQAAARGVVA VAEAHMARAL 
RVISVERGYD PRDFVLVSFG GAGGLHAATL ARALGIRRVL VPAQASVLSA LGMLAADVVR 
DYVRTVMLPG TTSAEELRRR LDPLVRQGRE ELRAEGFASG QIRIERLLDV RYPGQSYELT 
VPFGRGWIRA FHRLHRRRYG YATPDLVPEI VNLRVRATGP IAPPALPTVE AGDPVPPSEA 
LLDRTPVVLE TSRADVPFFD ATRLRAGNRL LGPAVLVRPD TTIYLPPETT AHVDRFGHVW 
IDT