| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1062 |
|---|
| Symbol | |
|---|
| ID | 8567703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 1211916 |
|---|
| End bp | 1213475 |
|---|
| Gene Length | 1560 bp |
|---|
| Protein Length | 519 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | 5-oxoprolinase (ATP-hydrolyzing) |
|---|
| Protein accession | YP_003290342 |
|---|
| Protein GI | 268316623 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0859035 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCCGG TTCGGCTGGA AATTTTTCGC CACCTGCTGG CCGCGGTGGC TGAGGAAATG
GGCGCCGTGC TGCGCCGCAC TGGCTTTTCG CCGAACATCA AGGAGCGCCG CGACTATTCG
TGCGCGCTGT TCACGTCCGA TGGCGAACTG GTGGCCCAGG CCGCCCACAT TCCCGTACAT
CTGGGCGCGT TGCCGCTGTC GGTACAGACC TGTCGCGAAG CATTCCCCGA GCTGAAACCG
GGCGATGCCG TGCTGCTCAA CGATCCGTTC CGGGGTGGCA CGCACCTGCC GGACCTGACG
CTCGTTTCGC CGGTGTTCGT CGAAGGGCAG TTGCTCGGTT TCGTGGCCAG CCGCGCCCAC
CATGCCGACA TCGGCGGCAT GGCACCGGGC TCGATGCCGC TGTCGCGCGA AATCTTTCAG
GAAGGACTCA TCATCCCGCC CGTTAAGCTC ATGGAGCGCG GCCGCCCGAA CCGGACCGTG
TGGGAATTGC TGCTCGCCAA CGTGCGCACG CCCGACGAAC GGCGCGGCGA CCTGCGTGCG
CAACTGGCCG CCAACGAGCG GGGCGTCCGG CGCCTGCAGG AGCTGGCCGC CGCCTACGGC
CTCGATACGC TGCGTGCGGC CTTCAGGGCC CTGCTGGATT ATGCCGAGCG GTTGATGCGC
ACCCTGCTGC AGACGCTGCC TGACGGCACC TGGCGCTTCG AAGATGCGCT CGACGACGAC
GGGATCAGCG AAGCGCCCCT GTGGATCCGG GTCGCACTGA CCATTGCGGA CGACACGGCC
ACGATTGACT TTTCCGAAAC CGATCCCCAG TGCGCGGGCA GCCTGAACGC CGTGCGTGCC
ATCACCGTCT CGGCCGTGTA CTATGTGTTC CGGGCCCTGC TGGGCTACGA CGTACCCGCC
AATGCAGGCT GTCTACGGCC TCTGCGGATC GTCACCCGGC CCGGCACGCT GGTCGATGCC
CGGCCACCGG CGGCGGTCGC CGGCGGCAAC GTGGAAACCT CCCAGCGGAT CGTCGATGTG
CTGCTGGGCG CGCTGGCGCA GGTCTGCCCC GATCGCATTC CGGCCGCCTC TCAGGGTACC
ATGAACAACC TGACGATCGG CGGCCTCGAT CCGCGCACCG GCCGTTACTA TGCCTACTAC
GAGACGCTGG CCGGCGGCGC CGGGGCCCTG CCCGATGCCG ATGGCACCTC GGCCGTGCAC
ACGCACATGA CGAACACGCT GAACACGCCC GTCGAGGCGC TCGAGTACGC CTATCCGCTC
CGCGTAACGC ACTATGCGAT CCGAGACGGT TCGGGCGGCG CCGGCCGCCA CCGGGGCGGC
GACGGACTCA TCCGGGAGAT CGAGCTGCTG GCGCCGGCAC AGGTTACCTG GCTGACCGAA
CGGCGGCGAC GGGCGCCCTA CGGTCTGGCC GGCGGTGCGC CGGGCCAACC CGGCCGCAAC
CTGTGGATTC ACCGGGGCGA GGTGCGCCAG ATGCCCGGAA AGACCAGTTT TCAGGCCGAG
GCCGGCGACC GCATCCGCAT CGAAACCCCC GGAGGCGGCG GCTGGGGCCC GCCTGCGTAG
|
|---|
| Protein sequence | MDPVRLEIFR HLLAAVAEEM GAVLRRTGFS PNIKERRDYS CALFTSDGEL VAQAAHIPVH
LGALPLSVQT CREAFPELKP GDAVLLNDPF RGGTHLPDLT LVSPVFVEGQ LLGFVASRAH
HADIGGMAPG SMPLSREIFQ EGLIIPPVKL MERGRPNRTV WELLLANVRT PDERRGDLRA
QLAANERGVR RLQELAAAYG LDTLRAAFRA LLDYAERLMR TLLQTLPDGT WRFEDALDDD
GISEAPLWIR VALTIADDTA TIDFSETDPQ CAGSLNAVRA ITVSAVYYVF RALLGYDVPA
NAGCLRPLRI VTRPGTLVDA RPPAAVAGGN VETSQRIVDV LLGALAQVCP DRIPAASQGT
MNNLTIGGLD PRTGRYYAYY ETLAGGAGAL PDADGTSAVH THMTNTLNTP VEALEYAYPL
RVTHYAIRDG SGGAGRHRGG DGLIREIELL APAQVTWLTE RRRRAPYGLA GGAPGQPGRN
LWIHRGEVRQ MPGKTSFQAE AGDRIRIETP GGGGWGPPA
|
|---|
| |