Gene Rmar_1015 details

Gene Information

• Locus tag: Rmar_1015
• ID: 8567655
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 1166738
• End bp: 1168843
• Gene Length: 2106 bp
• Protein Length: 701 aa
• Translation table: 11
• GC content: 64%
• Product: hypothetical protein
• Protein accession: YP_003290297
• Protein GI: 268316578

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.693082
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGATC AACGGCAAAG TTACGAAAAA AGTTCGCTCA GCGCAAGCAA ATCGCATGCG 
AATGACGGAC TGCCGCTGCT ACTCCGCTGT CCATCCTGCG GCGGCGACGG GCGCCTGATG 
GTCGCTCATA CGGCGCTGGG TCATGTCCAC GCGCGCTGCC TGGGTGCCGA AGACGCACCA 
GCCTGCACGG CGGAGCAACT CGCGCTTCAC TTTGCAGGAG CCGAGGTCGT AGATCAATTT 
TTGCTCCGCG TCGACGATGT CGAACTCCTT CGCACAAAGC TTCAGGAGGC CGTTGACGTC 
GCGCGGGTGC AGCTGGAAGA AGAGGCGGCC CGGGTCGAGG TGGAGACCGG AAGTGAGAAA 
AGGCAGGAGC GGCGTTCCGC GATCGACCGC CTGATCGAGT ATGCGCGCGC CGATTTCGAG 
CTTTTCCACA CGCCCGAGGG TACGGCCTAC CTGCGTACGA CCGACGGCCT CTGCTACCGG 
CTCGCCTCGG CTCAGGGGCG GTCGCTACTG GCCCGGGCGT TCTACGCGCG CGAGGGGAAG 
GGCGCCTCCA GCAGCGCGAT TTCCGAAGCA CTGCCTACGC TGGAGGCCGT CGCACGCTTC 
GACGGTCCGT GCCATCCGGT TTCCGTGCGC GTGGCCCGCG AGGGCGATCG CATTTATCTC 
GATTTAGGCG ATGAAACGGC TCGGGCCGCC GAGATCGACG CCGAGGGCTG GCGCCTTCGG 
CCGATTGCCG AACTTCCAGT CCGCTTCGAG CGGCCGCCGG GCACCAGACC GCTACCGGAA 
CCGGTGCGTG GAGGCGACTG GAATGTACTT CGCGAGCTGC TGAACACCGA CCGCGCCGGT 
TTCATCCTGG CTACCGCCTG GCTTGTCGGC ACGCTCGCTG TGTTACCGGC CTATCCCGTT 
CTGGTGCTTA CCGGGCCCCA GGGAAGCGGA AAATCGACGG CCTGCCGCCT GTTGGCGTCT 
CTGATCGATC CGCGCCAGGC GCCGCTGAAT GCCGCGCCGC GCGAGCTGCG CGACCTGGCC 
ATCTACGCAC AAAATGCCTA CGTGGTGGTA TTGGACAACG TCTCCAGCCT GCCGGTCTGG 
CTTTCCGATA GCCTGTGCCG GCTGGCGACG GGGAGCGGCT TTCGGACGCG CCGCCTCTAC 
ACCGATAGCG ATGAGGTCGT TTTCGAAGCC GTGCGGCCAA TCGTGGCCAA CGGCATTCCG 
GATTTTGTAC GCCAGCCAGA CCTGGCCGAT CGCACGCTGC CGGTACGGCT CCAGCTCATG 
CCACCGGAGC GCCGCCGCAC GGCCGAGGAG GTGGAAGCGG CCTTTCGTGA GGCAGCGCCT 
GGCCTTCTTG GCCTGCTGCT TGATGCCGTC AGCACCGGCC TTCGACGCAA AGCCGAGGTT 
CAGCCTGCCA GTCTTCCGCG AATGGCTGAT TTCGCGACCT TTGTTCTGGC GGCGGCGGAG 
GCACTGCCTT TCACCGAGGA GGAATTCCTT GAGGCGTGCG GCGCCGGTCA GGCCGAGCTG 
GCGGCCTCGC TGCTTGAGGA CAGCTTCGCC GAGGCCCTGC TGTCGTTTGC CGAGGCCGTC 
GAGACCTGGG AGGGCATGGC CTCGGAGCTT CTGGAGGCCA TGCTGCAGCG CGGCCAGCAT 
GAACGTCCGC CGCGGGGATG GCCAAAGACG GCGCAAAGCG TCGGCTCGAC GCTGGCACGT 
CTTGAGCCGG TGATGTTGCA AGTAGGGGTG AAGCTGGAGC GCGTGAGAGC AGGCAAGGCC 
AGGACGCGAC TTATCCGAAT CCAAAAAGTT GCGAATCAAA CGTCCGCCTT GTCCGCCTTG 
TCCGCCAACG GTAAAAATGG CTCAAAACAG CAAAATCTGG CCGATTCTGC AGCTCCGGCA 
GGCGGACAAG TGGCGGACGA CCTTTTCAAC AGTTGTCCGC CTGTTGTCCG CCACCGATCG 
CCTGAAATCA GCCAAAATAG GCCATTTTCG AAGGGGCGGA CAACGGCGGA CGAGGCGGAC 
AACCTTTTCG AAACTTTTTG GGATGGTGCT GGCGCCGGCG TGGCCGACCG CACGGAGACA 
GCAGAAGGTG ACAACGATGG CTGGTGGGAC CCCTTCGAAG ACGATGAAGA CGAAGCGCCT 
TTCTGA 

 

Protein sequence

MKDQRQSYEK SSLSASKSHA NDGLPLLLRC PSCGGDGRLM VAHTALGHVH ARCLGAEDAP 
ACTAEQLALH FAGAEVVDQF LLRVDDVELL RTKLQEAVDV ARVQLEEEAA RVEVETGSEK 
RQERRSAIDR LIEYARADFE LFHTPEGTAY LRTTDGLCYR LASAQGRSLL ARAFYAREGK 
GASSSAISEA LPTLEAVARF DGPCHPVSVR VAREGDRIYL DLGDETARAA EIDAEGWRLR 
PIAELPVRFE RPPGTRPLPE PVRGGDWNVL RELLNTDRAG FILATAWLVG TLAVLPAYPV 
LVLTGPQGSG KSTACRLLAS LIDPRQAPLN AAPRELRDLA IYAQNAYVVV LDNVSSLPVW 
LSDSLCRLAT GSGFRTRRLY TDSDEVVFEA VRPIVANGIP DFVRQPDLAD RTLPVRLQLM 
PPERRRTAEE VEAAFREAAP GLLGLLLDAV STGLRRKAEV QPASLPRMAD FATFVLAAAE 
ALPFTEEEFL EACGAGQAEL AASLLEDSFA EALLSFAEAV ETWEGMASEL LEAMLQRGQH 
ERPPRGWPKT AQSVGSTLAR LEPVMLQVGV KLERVRAGKA RTRLIRIQKV ANQTSALSAL 
SANGKNGSKQ QNLADSAAPA GGQVADDLFN SCPPVVRHRS PEISQNRPFS KGRTTADEAD 
NLFETFWDGA GAGVADRTET AEGDNDGWWD PFEDDEDEAP F