| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_1012 |
|---|
| Symbol | |
|---|
| ID | 8567652 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1161733 |
|---|
| End bp | 1164822 |
|---|
| Gene Length | 3090 bp |
|---|
| Protein Length | 1029 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003290294 |
|---|
| Protein GI | 268316575 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.135444 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTGC GCGAGGCGCC GGGGCTGAAG CAGGAAGCGC TGTACCGTGC CCTTTTCGAA
ACGACTCAGG ACGCCGTTCT GATCGCCGAC GCCGAAACCG GCCAGATCCT GGAGGCCAAT
CCGGCGGCCG AGCGGCTTTT CGGCTACGAT CGGGCTACCC TGTGTCGGAT GCATCAGGAG
GAGCTGCATC CGGCCGAACT TGCCGCTTCC TATCGAAAAA AATTCCGCCG GGCCGTCGAG
GCCGGCACCT TCCGGGAGCG TGGACTGATC GTGCAGCACG CCGACGGAAG CTGGATTCCC
GTCGAACTCT CGGGCCAGGT GCTCGAAGTC GGTGGCCGGA AGTTGATCCA GGGCGTTTTT
CGTGACCTGC GCGAGTTGCA GCGCCTGACC GAAACCGAGG CGCTCTACCG CACGCTGTTC
GAGACGAGTC TGGCCGGGAT CTACCTGCTG CAGGACGGGC GCGTTGTGGT GGTCAATCCG
CAGGCCGCTG CCATGTTCGG CTACACACCC GAGGAGATCG TCGGACGTCC GGTGCTGTCC
ATTGTGGCGG AAGAAGACCG CGAGCTGGCC GCCGAAAACA TCCGGCGTCG GCTGGCCGGT
GAAGTAGAAG AGATCCGCTA TCGATTCCGG GGGCTGCGCA AGGATGGGAG TCGGTTCTGG
GCCGAGGTGC GTGGCCGCCG CATCGTTTAC AACGGGCGGC CGGCCATCCT GGGCACGGTG
CTGGACATCG ACGAGCAGGT ACGGGCCATC GAGAAACTGA AACAGAGCGA GGCCCGCTAC
CGCCGTCTGT TCGAGCACAG CGTGGCCGGT TTCTATCGGA CCACGGTGGA CGGTCGAATC
CTGCGCGTCA ACCCGGCGCT GGCCCGCATG CTGGGCTACG ACGATCCCTC TGAACTGGAA
GGCCGTCCGA CCAGCATTCT TTACGTGGAA GAAGCTGATC GCGCGCGCTT TCTGGAGACG
CTGCGTCGGG AGGGCCGACT CGTCAACTAT GAGGTTCGGT TGCGCCGAAA GGACGGCCGC
GTGCTCTGGG GACTGGAGAA CGTGCTGCTG GTGCAGGAGC CGGACGGCAC CGAGTGCATC
GAGGGCACGC TGATCGACGT GACCGAGCTG CTGGAGCAGC GCCGGCGGTA CCTGGGGCTC
TACGCGCACA CGGAAGACGC CATCTTCTGG ATTCGCGTCA CGGACGACGG CCGGTTTCTG
GTGGAGGCGA CCAACCCCTC GCACCAGCGC AAGACCGGGC TCACGCCCGA AATGCTCTGG
AACCGACCGC TGAACAAAAT CCTGCCACCC GACATCGTGG CCCACGTAAC GGGCAACTAC
CGGCGCTGCC TGGAAGCCGG CCATCCCATC GAGTACGAGG AGACGCTGGA TCTGCCGGCC
GGCCGCCGTA CCTGGCTGAC GCAGCTTGTG CCCATTCCCG ATCCGGACGG CCGCATTCGG
CTCATCGCTG GCATCGCCCG CGACATCACT GAGCTGCGGC GGTTGCAGGC GCTGCTGGAG
GAGGAGGGGC TGTTTCTGGA GCAGCTCGTC TCCGGTGCTT CGCGCAAGAC GCTCTGCGAG
CGGCTCTGCC GCGTGGCCGA GCGCTTCATC GAGGGCGCCC GCGCTTCGGT CTGGATGTAC
GACGAAGGGC GGCTCCACCT GTGCGCCGCA CCGGAGCTTC CTGAATCGTT CCGGGCACTC
TTCGACGGAC AGCTCATCGG CTCCAATCAG GGATCGCTGG GTGAGGCCGC CTTCAGCCGT
CGGCCGGTCT GGGTCTCCGA CATCAAGCAC GATCCGCGCT GGGGAGCCTT TCGGGAGCAA
GCGCTGGCGC AGGGGCTTCG CGCCTGCTGG GCCGTTCCCT TCTTCGGGCG GAAAGGCGAA
CTGCTGGGCG TGCTGGGCCT GTGCTTCGAC CAGGTGCGCA GCCCCCTGCC CGACGAACAG
GCCGTCGTGG CCCGGCTGGC CCACCTGGCC GGCGTGGGCA TGGCCAAGGT GCGGCTCCGG
GAAGAACGGG AGCGGCTGGC CCGCGTGGTG GCGCAGATCA CCGAGGGTGT GGCCATCACC
GACACGATGG GCAACGTGGT GTGGGTCAAC GAGGCCTTCA CGTGCCTGAC CGGCTACCGC
GCGGACGAGG TGCTGGGGAA GAACATCGAG CACCTGCTGC ACGGCCCGGA GACCGACCGC
GATACGCTCC GGCGCATGCG GCTGCGTCTG TTGCGGGGAC GTCCGGCGCA CGCCCGGCTG
TATCACTACC GCAAAGATGG CTCGGGCTTC TGGGACGAGG TGCACATCGA TCGCCTTTAC
GACGAGCAGG GGCAGCACAT CGGCTACATC GGCCTGATGG CCGACGTGAC GGAGCTGGTG
GAAGCCGAGC GGCAGTTGAA AGCGGCCAAA GAGCGGGCCG AAGAGGCCAG CCGTCTGAAG
TCGGCCTTTC TGGCCAATAT GAGCCACGAG ATCCGAACGC CGCTGACGGG CATTCTGGGC
TTTGCCGAAC TGCTCGACGA GGAGCTGGAG ACCCGCCAGC AGGAAGACCT GCGCGAGTTT
ACGCACATTA TTGACCGCTC GGCGCGGCGG CTGCTGACGC TGCTCAACGA CATCCTGGAC
CTGAGCAAGA TCGAAGCCAA CCGACTGGAG CTCAAGCTGC AGCCCACCGA TGTGGTGGAC
GTGGCTCGTC AGGCCGTGCA ACTCATGCAG CCCCTGGCCG AGGAGAAGGG GCTGAAGCTG
GAACTACACG CCGAGGAAAA CCTGACGGCC CGGGCCGATC CGAACCGGCT GCATCAGGTG
CTGGTCAATC TGCTCTCGAA CGCCATCAAG TTCACCGACG AAGGCCATGT GCGCGTCGAG
CTCGGGCAAA AGAAGGGATG GGTCTTACTG GCCGTGGAAG ATACCGGCTG CGGCATCAGT
CCCGAGTTCC TGCCGCATCT GTTCGAGCCG TTCCGTCAGG AGCACGAAGG GCTGACGCAG
AAACACCAGG GGGTGGGTCT GGGCCTGGCC ATCGTCAAGC GACTGATCGA CCTGATGAGC
GGCCAGATCA CCGTGCAGTC CGAGGTGGGC CGGGGAACCC GCTTCGAAAT CCTGCTGCCG
AGCGTCGAGC ATGGCCCGGC GGTTAGTTAG
|
|---|
| Protein sequence | MEVREAPGLK QEALYRALFE TTQDAVLIAD AETGQILEAN PAAERLFGYD RATLCRMHQE
ELHPAELAAS YRKKFRRAVE AGTFRERGLI VQHADGSWIP VELSGQVLEV GGRKLIQGVF
RDLRELQRLT ETEALYRTLF ETSLAGIYLL QDGRVVVVNP QAAAMFGYTP EEIVGRPVLS
IVAEEDRELA AENIRRRLAG EVEEIRYRFR GLRKDGSRFW AEVRGRRIVY NGRPAILGTV
LDIDEQVRAI EKLKQSEARY RRLFEHSVAG FYRTTVDGRI LRVNPALARM LGYDDPSELE
GRPTSILYVE EADRARFLET LRREGRLVNY EVRLRRKDGR VLWGLENVLL VQEPDGTECI
EGTLIDVTEL LEQRRRYLGL YAHTEDAIFW IRVTDDGRFL VEATNPSHQR KTGLTPEMLW
NRPLNKILPP DIVAHVTGNY RRCLEAGHPI EYEETLDLPA GRRTWLTQLV PIPDPDGRIR
LIAGIARDIT ELRRLQALLE EEGLFLEQLV SGASRKTLCE RLCRVAERFI EGARASVWMY
DEGRLHLCAA PELPESFRAL FDGQLIGSNQ GSLGEAAFSR RPVWVSDIKH DPRWGAFREQ
ALAQGLRACW AVPFFGRKGE LLGVLGLCFD QVRSPLPDEQ AVVARLAHLA GVGMAKVRLR
EERERLARVV AQITEGVAIT DTMGNVVWVN EAFTCLTGYR ADEVLGKNIE HLLHGPETDR
DTLRRMRLRL LRGRPAHARL YHYRKDGSGF WDEVHIDRLY DEQGQHIGYI GLMADVTELV
EAERQLKAAK ERAEEASRLK SAFLANMSHE IRTPLTGILG FAELLDEELE TRQQEDLREF
THIIDRSARR LLTLLNDILD LSKIEANRLE LKLQPTDVVD VARQAVQLMQ PLAEEKGLKL
ELHAEENLTA RADPNRLHQV LVNLLSNAIK FTDEGHVRVE LGQKKGWVLL AVEDTGCGIS
PEFLPHLFEP FRQEHEGLTQ KHQGVGLGLA IVKRLIDLMS GQITVQSEVG RGTRFEILLP
SVEHGPAVS
|
|---|
| |