Gene Rmar_0890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0890 
Symbol 
ID8567528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp1002697 
End bp1003920 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content62% 
IMG OID 
Productpolysaccharide biosynthesis protein 
Protein accessionYP_003290173 
Protein GI268316454 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.362175 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGCCC GGCTGCTGGG TGCCGAGGGG TACGGCATTT ATGCCTACGC CTATGCACTG 
GTTACGTTGA TAGCCATTCC GGTGCAGTCA GGGTTGGCCG AGTTGATGAT GCGGGAGACG
GCTCGGGGTA TGGCCGAGGG GCGTCCAGAG CTGGTGCGGG GCGTATGGCA GTGGATGGGT
CGGGTTGTGG TACTGTTGCT GGGAGTTTTT GTGTTGCTGG TCGGTCCGGT GCTGGTCATC
TGGCAGGGGG GGCTGGCGAG TATTTCGGGG CAGACGATGG CCTGGGCGCT GGTGGTGTTG
CTGTTTTTCG GGCTGGGGAG TTTGCCGGGG GCGGCGCTTC GGGGACTGGG GCGTGTGGTC
CTGGGGCTGG TTCCGGAGTA CGTGGTGGGC CCGGGCCTGT TGCTGGTGCT GGTAGGTGGA
GTGGCCCTGG TGGCGCGGGA GGTGTTGTCG CCGGTGGTGG CGATGGCGCT GCATGCAGGG
GCGCTGCTGA TAGCTTTCGG GGTAGGGTTA CGGTTGTGGT GGCGGGAGAG GCCGGAGGCT
GTGCGGCAGG TGCGGCCCTG CGTAGAGACG AGGGGTTGGT TGGCGAGCGG CCTAATATTC
GGATTGATGA GTGGATTTGC AGTGGTGAAC AGTCAGGCGG GGACGGTGTT GCTGGGAATG
TTTGCCGAGC CGGAGGCGGT GGGAGTGTTT CGTGTGGCGT TGCAGGTGGC GGCGCTGGCA
TCGTTTGCGT TGCAGGCGGT GAATCTGGTA GTGGCGCCGC GTTTTGCAGA GCTATACGCG
CAAGGTGAGA TGGCGAAGTT AGAGCGACTG GCGGTAGGAA GCGCCCGGGC GGTATTTGCG
TTCAACGTAG TGCTGACGGT GGGTTTTGTA GGGGTGGGGC GGTTCTTTTT CGAGCAGGTG
TTCGGGAAAG AGTTCGCGGC AGCCTATGGG CCGTTGCTGG TGCTGCTGGT GGGGCAAATG
GTAAATTCAG CAGTGGGGTC GGTGGGGTAT TTACTGAGCA TGACGGGGCA TGAGCGGGAG
ACGGCCCAGG GAATGGCCGT GGCGGCAGTG GTGAATGTGG TGCTGGGATT AGCGCTGATT
CCGTGGTGGG GGATTTACGG GGCTTCGGTG GCCACGGCGG TGGCGATGGG GGTGTGGAAT
GGAATATTGT GGTGGCGTGT AAGGAAGCGA CTTCAAATAG AGAGTTGGGC GTTTTATAGA
GAAACAGAGT TGTCAGAGCA ATGA
 
Protein sequence
MLARLLGAEG YGIYAYAYAL VTLIAIPVQS GLAELMMRET ARGMAEGRPE LVRGVWQWMG 
RVVVLLLGVF VLLVGPVLVI WQGGLASISG QTMAWALVVL LFFGLGSLPG AALRGLGRVV
LGLVPEYVVG PGLLLVLVGG VALVAREVLS PVVAMALHAG ALLIAFGVGL RLWWRERPEA
VRQVRPCVET RGWLASGLIF GLMSGFAVVN SQAGTVLLGM FAEPEAVGVF RVALQVAALA
SFALQAVNLV VAPRFAELYA QGEMAKLERL AVGSARAVFA FNVVLTVGFV GVGRFFFEQV
FGKEFAAAYG PLLVLLVGQM VNSAVGSVGY LLSMTGHERE TAQGMAVAAV VNVVLGLALI
PWWGIYGASV ATAVAMGVWN GILWWRVRKR LQIESWAFYR ETELSEQ