Gene Rmar_0836 details

Gene Information

• Locus tag: Rmar_0836
• ID: 8567474
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 958289
• End bp: 960382
• Gene Length: 2094 bp
• Protein Length: 697 aa
• Translation table: 11
• GC content: 63%
• Product: ATP-dependent metalloprotease FtsH
• Protein accession: YP_003290121
• Protein GI: 268316402

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.473024
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCGCAGA ACGAGCGCGA CAGCCTGGAG CTGGAACGGA AAAATACGCC TCCCGACGGC 
CCTCGCCTGC CTGAGCGGCG GCCGCGGTTT TCCGTCTGGA TTTATCTGGC GATTTTCCTG 
GCGCTGCTGG TGCACTTTTT CCTGTTCTGG ACGGGCACCG ACACCAGCAC CATCGAATAC 
AGCCAGTTTC TCGAATACGT AGAAAAAGGC TACGTGGAGC GCGTCGAGAT TGTCAACGAC 
ACGAAAGTGC AGGGGCGCTT CACGGAGGCC GCCGTACGCG AGGGCCTGGT GTCGGTACCG 
GTGCGCCAGA CCGACCTGCT TCGCGGCGCG CAGACGCCCG AACTGATCCG CCGCTTTACG 
ACCACCAAAC CGGCCGATCA TGATCTGACC AGCTTCCTGC TGGCCTACAA CGAACGGGCC 
CGCGCCGAGG GCCGTCCTAC CGTACAGTTC ACCGCCCGCA TCGAGGAGAA CTGGTTCGGC 
GGGCTGCTCA CGTGGATCTT TCCGCTCATT CTTATTGTGG CGCTCTGGGT GTTTCTGCTG 
CGCCGCATGA GCCCCAGTTC GCAGGTGCTC AATATCGGAA AGAACCGGGC CATTCTCTAC 
GATGCGATGG GCGATCACCG GGTCACGTTC AAGGACGTGG CCGGACTGGA CGAGGCCAAA 
GAAGAGGTCG CGGAAATCGT CGAGTTTCTG AAGAACCCGA AGAAGTTCAC GCGTCTGGGT 
GGCAAACTGC CCAAAGGCGT GCTGCTCGTA GGACCGCCGG GCACGGGGAA GACGCTGCTG 
GCCAAAGCGG TGGCCGGTGA GGCGGGCGTG CCGTTCTTTT CCATTTCGGG GAGCGACTTC 
GTCGAGATGT TCGTGGGCGT GGGGGCCGCG CGCGTGCGCG ATCTGTTCCG GCAGGCCAAG 
GAAAAGGCGC CCTGCATCAT TTTTATCGAC GAGATCGACG CGATCGGTCG CTCTCGTGGC 
CGCGGTATCA TGATGGGCGC CAACGACGAG CGCGAAAACA CGCTGAACCA GCTGCTCGTC 
GAGATGGACG GCTTCAACAC GGACAAGGGC GTCATCATCA TGGCGGCCAC GAACCGTCCC 
GACGTGCTCG ATCCGGCCCT GCTGCGGCCC GGCCGCTTCG ACCGACAGAT TCTCATCGAC 
AAGCCCGACC GCCGCGAGCG GCTGGAGATC TTCAAGGTGC ACACGCGCGA TCTGATCCTG 
GGCGACGACG TGGACCTGGA GGTGCTGGCT GGCCAGACGC CCGGCTTCGC CGGGGCCGAA 
ATCGCCAACG TCTGCAACGA GGCGGCCCTG CTGGCGGCCC GGAAGGGCAA AGAAGCTGTC 
GAGATGGAGG ACTTCGAGCA GGCGATCGAT CGCGTGATCG CCGGCCTGGA AAAGAAAAAC 
AAAATCATTT CCCCGGAAGA ACGCGAGATC GTCGCCTACC ACGAAGCCGG CCATGCCATC 
GTCGGCTGGT TCCTGCGCTA CACGGACCCG GTCGTCAAGG TCTCTATCGT CCCGCGCGGA 
CTGGCCGCCC TGGGCTACGC GCAGTACCTG CCCGAAGAGC GTTACCTCTA CACGAAAGAG 
GCGCTGCTCG ACCGGATGAC CATGGCCATC GGCGGGCGCG TGGCCGAAGA GCTGGTCTTC 
GGACGCATCT CGACCGGCGC GCAGAACGAC CTGGAACGCA TCACGCGCAT GGCCTACGCC 
ATGGTGGTAG ACTACGGCAT GAGCGAGCGC GTCGGATATG TCAGCTTCAA CCTGTCGGGC 
CAGTATGGCG AGCAGGCCTT CTTCGACAAG CCGTACTCCG AGGAGACGGC GCGGCTGATC 
GACGAAGAGG TGCGCCGGAT CATCAACGAG GTGCGGGAAC GTGCCCGCCG GATCCTCGAA 
GAAAAGCGGG ACAAGCTGGA GGCGCTGGCC CGCCGGCTGC TCGAAAAAGA GGTGCTGGGC 
CCGCGCGATC TGGTGGAGAT TCTCGGCCCA CGTCCCTACG GCGATTATCC CTCGCCCAAC 
GGTAAGGACG TGGAAGAATT GAAAGATCTG CAAAAAGGCG AACCCACCTC GTCTTCCGCC 
GTTGAAGCGC CTGCTCCGCA GACGGAGCGG CCCGAATCCT CTTCTGCCCC CTGA 

 

Protein sequence

MSQNERDSLE LERKNTPPDG PRLPERRPRF SVWIYLAIFL ALLVHFFLFW TGTDTSTIEY 
SQFLEYVEKG YVERVEIVND TKVQGRFTEA AVREGLVSVP VRQTDLLRGA QTPELIRRFT 
TTKPADHDLT SFLLAYNERA RAEGRPTVQF TARIEENWFG GLLTWIFPLI LIVALWVFLL 
RRMSPSSQVL NIGKNRAILY DAMGDHRVTF KDVAGLDEAK EEVAEIVEFL KNPKKFTRLG 
GKLPKGVLLV GPPGTGKTLL AKAVAGEAGV PFFSISGSDF VEMFVGVGAA RVRDLFRQAK 
EKAPCIIFID EIDAIGRSRG RGIMMGANDE RENTLNQLLV EMDGFNTDKG VIIMAATNRP 
DVLDPALLRP GRFDRQILID KPDRRERLEI FKVHTRDLIL GDDVDLEVLA GQTPGFAGAE 
IANVCNEAAL LAARKGKEAV EMEDFEQAID RVIAGLEKKN KIISPEEREI VAYHEAGHAI 
VGWFLRYTDP VVKVSIVPRG LAALGYAQYL PEERYLYTKE ALLDRMTMAI GGRVAEELVF 
GRISTGAQND LERITRMAYA MVVDYGMSER VGYVSFNLSG QYGEQAFFDK PYSEETARLI 
DEEVRRIINE VRERARRILE EKRDKLEALA RRLLEKEVLG PRDLVEILGP RPYGDYPSPN 
GKDVEELKDL QKGEPTSSSA VEAPAPQTER PESSSAP