Gene Rmar_0546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0546 
Symbol 
ID8567180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp619728 
End bp621467 
Gene Length1740 bp 
Protein Length579 aa 
Translation table11 
GC content66% 
IMG OID 
Productpeptidase M28 
Protein accessionYP_003289835 
Protein GI268316116 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.62656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCAAC GTATTGCACG AACATTTTTC GGCGTCCTGC TGGCATGCTG GCCCCTGCTG 
TCGCAGGCAC AGAGCCAGCG TCCCGCCCCC ACCCCCACCG TGTTCGACCA ACCCGCGCTC
GTGCAGCGCT ACCAGACGAC GATCACGCCC GAAGACCTGG CCGCGCATCT GTTCATCGTG
GCCTCTGACT ACTTCGAGGG ACGCGAAACC ACCACGCGCG GACAGAAACT GGCCGCCTAC
TATCTGGCCT CCCAGTATCG CAAACTGGGC CTCGAGCCCG CCGGCACGCT GAAGCCGGAC
CATCCCTACG CGCCGGAAGC CTACTTCCAG CCGTTCACCG TCTATGGCCA GCGGCTGCAG
GAAGCACACC TGATCGCCGT GCAGGGCGCC GACACGCTGG CCGCGCTGGC GTTCGGTCCG
GAGCAGGCCG ACCCGAACGG CTACCTGTGG TTGGGCGTCC GGCCCGAAAG CACCGGCGAG
CTGGTCTTCG GCGGCTACGG CATTGCCGAT CCCGAGCTGG GCTACAACGA CTACGCCGCG
CTGGCGGCCG ACAGCATCGA CCTGGTAGGC CGCTGGCTGC TGATTCTGGC CGACGAGCCG
CTGGCCAACG ACTCGACCAG CCTGCTGACG CCGGACGGCC GTCCCTCACG GTGGACCACC
CAGCCGTTCC TCAAGCTGCG CCGGGCGCTG GAGGCCGGCG TGGCCGGCGT GATCCTGGTA
GGCGACCGCT CCCCGCAGGC CGACGAGCCT CTGGCCGAAC GCGCCGCCCG CGCCGCGCTG
CGCGCACGCA CCAGCGTCGG GCGCCTTTCG CTCACACCGC CGCAACAGGG CGGCTTTCAA
CTACCGCCGA TCTGGGTGGT CAGCAGCCAG GTGGCCGATG CGCTGCTGGC TCCGAGCGGC
CGCACCATCG CCGAGCTGCA GCAGCAGCTC GACGAAAGCC GCCAGCCCGT CGTCTTTGCC
GTGCCTGCGG TCACCATCCA CGGCCGGCTC GTGCAGGAAA CCTACCAGGC GCAGACCGAG
AACGTGCTGG CCTACATCGA AGGCGCCGAC TCGCTGCTGA AGCACGAAGT GGTGGTCCTC
TCGTCGCATT ACGACCACGT GGGCGTCGAT CCGACGGCCG AAGGCGACGG CATCTACAAC
GGCGCCGACG ACGACGGCAC GGGCACCGTC GCGCTGCTCG AAATCGCCGA AGCCTTCATG
CAGGCCGCAC GCGACGGCTA CCCGCCTCGC CGCTCCATTC TGTTCCTGCA CGTGTCGGGC
GAAGAAAAGG GCCTGCTTGG CTCGGCTTAC TACACCGATC ACGAGCCGGT CTTCCCGCTC
GAACAGACCG TCACGAATCT GAATATCGAC ATGATCGGCC GCCACGACCC CACCCGGGAA
GGCGATTCCA ACTACGTGTA CATCATCGGC TCGAACCTGA TTTCGCAGGA GCTGCACGAG
ATCAACCTGC GCGTGAACGA AATCACCGGC ACGCGCCTCG TGCTCGACGA GCGCTTCAAC
AGCAAGGACG ATCCGAACCG GTTCTACGCC CGCTCCGACC ACTGGAACTT CGGCAAGCAC
GGCATTCCGT TCATTTTCTT CTTCACAGGT ACGCACGAAG ACTACCACGG CGTGGACGAC
GAGCCGCACA AGATCGACTA CGACCGCATG GCGCGGATCG TCCGCCTGAT TTTCGGCACG
GCCTGGCAGG TGGCCAACCA GGACAACCGC CCGGCCGTCA CGGGCACCGG CTTCAACTGA
 
Protein sequence
MRQRIARTFF GVLLACWPLL SQAQSQRPAP TPTVFDQPAL VQRYQTTITP EDLAAHLFIV 
ASDYFEGRET TTRGQKLAAY YLASQYRKLG LEPAGTLKPD HPYAPEAYFQ PFTVYGQRLQ
EAHLIAVQGA DTLAALAFGP EQADPNGYLW LGVRPESTGE LVFGGYGIAD PELGYNDYAA
LAADSIDLVG RWLLILADEP LANDSTSLLT PDGRPSRWTT QPFLKLRRAL EAGVAGVILV
GDRSPQADEP LAERAARAAL RARTSVGRLS LTPPQQGGFQ LPPIWVVSSQ VADALLAPSG
RTIAELQQQL DESRQPVVFA VPAVTIHGRL VQETYQAQTE NVLAYIEGAD SLLKHEVVVL
SSHYDHVGVD PTAEGDGIYN GADDDGTGTV ALLEIAEAFM QAARDGYPPR RSILFLHVSG
EEKGLLGSAY YTDHEPVFPL EQTVTNLNID MIGRHDPTRE GDSNYVYIIG SNLISQELHE
INLRVNEITG TRLVLDERFN SKDDPNRFYA RSDHWNFGKH GIPFIFFFTG THEDYHGVDD
EPHKIDYDRM ARIVRLIFGT AWQVANQDNR PAVTGTGFN