Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0516 |
Symbol | |
ID | 8567150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 582810 |
End bp | 584051 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | outer membrane efflux protein |
Protein accession | YP_003289806 |
Protein GI | 268316087 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGGTT TGCTGCTGGG ATTGAGTCTG CTGCTGGGCA ACCCCGACGT CGCCCCCGCC CCGGATACGC TGGGCATTCG GGAGGCACTG GCCCTGGCCT TGAGCCACCA TCCACAATTG CAGGCGCTGC GCGCCCGGCG GGAAGCGCTG CAGGGACGAC GGCTTCAGGC CTATGGGATC GAAACGCCAC AGCTCTACTT TTTTCGCGAA GGCATCGGAA GCGGTCAGGC GTTCGCCGAG CAGGGCTGGA CGCTGGTCGA GCGCATCGAC TTCCCGCTGG TTACTTATTA TCGCCTGCAA GCCAACGGCC TGGAATCCCG GGCGCTGACG GCCGAACTGG AAGCCACGAC CGCGCGCATC CGCGCCGACG TGAAACGCGC CTATACCGAC GTGCTCTACG CGCAGGAACT GGTGCATCTC CGACAGGAAG AGGTCGCACT GCTCGAGCAA CTCCGGGAGG CAGTGCGTGC GCGCGTGGCG GCCGGACTGG CAACCGATCT GGAGGTGACG CGCACCGAAA TCCAGCTGGC CGACGCGCAG TCGCGGCTGG AAACCGCACG TCGCGACTTC ATGCAGGCAC GCTACGAACT GTTTCGGGTC GTCGGACTTG ATCCGGAAGC TCAGCGCTAC GACATAGTCT TTCCGGATAC CCTCACCTAT GTGGCCGTCG AGATTCCCCA GGAGGCGGTG CTGGCACGCC TCGACCAGTT GCCCGAACTG CACAGCCAGC AGGCGCAGCT TCAGGCAGCC CGGGCAACTG TCCGGCAGGC ACGGGCTTCG TTGCTCCCTC AGCTGCAACT GGACGTCTAT CCCCAGGATT ACGGAAATGG GTATCGATTT GTGGGCTTTC AGATCGGGAT TTCACTTCCG CTGGGGTTTT TGCCGGGATA TCGGGGACGT GTACGCGAAG CCCGCGCCCT TTATGAAAGG CGACGATGGG AGCTGGAAGA CCTGCGCCTT CAACTCAAAA AACAGGCCGA GCAGGCTTGG CATGGCTACG AGACCGCCCG CATCGTCGTC GAACGCTACG CTCGCCAGAT CCGCGACCGT TCACGTGAGC TGCTGCACCG TCTGCAACGC GGCTACCGCC TGGGCGAAGT CAGCTTGATC GAGTTGCTCG ACGCGCAGCG GCTTGTTCTG GAAAGCGAGC AGCGTTATTA TGAGGCGCTT CGGGACTATT ATCACCAGCT GATCGAACTG GAGCGATTTC TTGGACATGA ACTGACCTTC ACCAACCCCT GA
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Protein sequence | MLGLLLGLSL LLGNPDVAPA PDTLGIREAL ALALSHHPQL QALRARREAL QGRRLQAYGI ETPQLYFFRE GIGSGQAFAE QGWTLVERID FPLVTYYRLQ ANGLESRALT AELEATTARI RADVKRAYTD VLYAQELVHL RQEEVALLEQ LREAVRARVA AGLATDLEVT RTEIQLADAQ SRLETARRDF MQARYELFRV VGLDPEAQRY DIVFPDTLTY VAVEIPQEAV LARLDQLPEL HSQQAQLQAA RATVRQARAS LLPQLQLDVY PQDYGNGYRF VGFQIGISLP LGFLPGYRGR VREARALYER RRWELEDLRL QLKKQAEQAW HGYETARIVV ERYARQIRDR SRELLHRLQR GYRLGEVSLI ELLDAQRLVL ESEQRYYEAL RDYYHQLIEL ERFLGHELTF TNP
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