| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0504 |
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| Symbol | |
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| ID | 8567138 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | + |
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| Start bp | 564462 |
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| End bp | 567428 |
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| Gene Length | 2967 bp |
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| Protein Length | 988 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | protein of unknown function UPF0027 |
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| Protein accession | YP_003289794 |
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| Protein GI | 268316075 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGAAT TGCGCTTTGT CAAGATCCAC GACTATCTCT GGGAGATTCC CAGGACGGGC
GGCATGCGGG TGCCCGCCCG CATCTACGCC AGCGAAAAGA TCCTGCGCGA ACTGAAGGAG
GATCAGGCGC CCCAGCAGGC CGTCAACGTG GCGCATCTGC CGGGCATCGT CAAGTACTCG
CTGGCCATGC CCGACATCCA CTGGGGCTAC GGCTTTCCCA TCGGCGGGGT GGCCGCGTTC
GATCTGGACG AAGGCGTGAT CTCGCCCGGC GGTGTTGGCT ACGATATTAA TTGCCTTACC
GGCGAGGCAC GGGTGCTTCA TGCCCATGGC TACTATCGCA CGATCGCCGA AATCGTCGAG
GCCGGTACGA ACGATCCGCT CTGCAGCTAT CGGTTTGCGG TGCGTCGGCC CGAGTCGGCC
CGGATCATTT ATCGTTTCGG GGAAACGCCG CGTACGCGCG TCTGGCGCGT CTGGACCCGG
GGCGGCGACA CCGTGGAGGC TACCGAAGAC CATCCGTTCT GGACGCCGCA GGGGATGGTG
CCGCTGCGGG AGCTGCGTCC CGGCGATCGG GTAGCGTTCT GTCCCTTCGA AGGCGTGCCC
TACGAGGCCC CGTCATCCGA GACCATCCTG AGCCCCGAGG CTTTCTGGGA AGCGCTGCGG
CAACTGGGCA TTCCTGATCG CGGTCGGCGT TACCGGCAGC TTGTGCGCTA TCTGACGCGC
CGTGGTCTAT TGCCGCTGCG CTACGATTCG CCTGCGTTGC CGCTCCTCTG CAAGCTGCTG
GGCTATCTTC TGGGCGATGG CACCTGCTAC CGGGAGCGCA ACGGCCGTAT CCGACTGGTC
GCCTACGGTC GCGCGGAAGA TCTGGAAGCG ATGCGGCATG ATCTGGAGGC GCTGGGAGTC
CGTGCGGCCC GACTGCGTCG GCGTCGCCGT CGGCATCGGG TGCAGACGGT TTACCGCCCC
TATGCCTTCG AGCGCGAAGA GGTCAGCCTG CACATCACCA GCCGGGCGTT TGCGCTCCTG
CTGGTCGCGC TGGGCATGCC GATCGGCGAT CGGACGGCCC AGGACTTCGA AGCACCGGCC
TGGCTGGAGC GAGCGCCCCG CTGGCAGAAA CGGCTGTTTC TGGCCGGGTT GTTCGGGGCC
GAGCTGTCGG CCCCGCGGCT CATGAGCGGG CATGCGCGTA CGTTTGCGAC CCCGGTGCTG
ACGCTGACCA AACGGGCACC GTTTGCCGAA AGCGGCCGCC GTTTCCTGGA GACGCTGGCG
CGCTGGGCAG CCGAACTGGG CGTACGCACG CAGGCCATCG AAGCCCGCCG GGAGCTGCTC
GCTACCGGCG AACGCGTGCG CTGGCAGTGG CGGATGGCAT CCGATCCGGC CAGCCTGCGG
GCGCTCTGGG GACGCATCGG TTACGAGTAC AACTTCCGAC GGCAGCACGA GGCCGCCTGC
GCGCTGCAGT ACGTCAAGTA CAAGGAGCAG GTGGTGCGGC AGCGCCAGGA GGCGGTGCGG
CTGCTGCGTC GCTGGAGGGC GGCCGGCGTG TCGGTCGGGG AAGCGACGAG GCGGCTGGCC
GATCAGGACA TCAACCGGCG CTTTGTCGAA CGCACCTATT ACGAGCAGCG CGGTGACACG
CCTCGCATTG GCGATGCGGT GTGCAGCTAT GCGGCATTTC GCCGGGAACG GCAGAACGGA
CAGGAGCCTC TGGGCTGCGT CTGGGAAGAG ATCGTGCGTA TCGAGCCGGT GGAACGGCCC
GAACTTCGGG TGTACGACCT GACCGTCGAT CATCCCGATC ACAACTTCAT CGCCAACGGC
TTTGTGGTCT CCAACTGCGG CGTGCGGCTG CTGGCCAGCC GGCTGACCTA CGAGGAGGTC
GAGCCGCATC TGGAGCGTCT CGTTGAGATG CTCTTCCGGC GCGTGCCCAC CGGCGTAGGC
GCCTCGGGCG CGCTCAGGGT CTCGAAACAG GAGCTGCGGC GCGTGGCCGT CGAGGGCGCG
CACTGGGCCG TGCGCCATGG ATTCGGTTCG GAAGTCGATC TGGAATTCAT TGAAGAAAAC
GGCCGTATTG AAGGGGCCGA TCCTGCAGCC GTCTCGGAGC GCGCCTATGA GCGGGGCGCG
GACCAGCTCG GCACGCTGGG TTCGGGCAAC CACTTCCTGG AGGTCGGCTA CGTGGCGCAG
ATCTTCGACG ACGAGGCGGC GCGGGTCATG GGGCTGTTCC CGGGGCAGGT GACCGTCATC
ATTCACACCG GATCGCGCGG CTTCGGCTAC CAGATCTGCG ACGATTATCT GGCCGTCATG
GACCGCGCGT TGGCCAGGTA CCATATCCGG TTGCCGGATC GCCAGCTCGC CTGCGCACCG
CTGCGCTCAC CGGAAGGCCA GCAGTATCTG GCCGCCATGC GCTGCGGGAT CAACTTCGCC
TTCGCCAACC GCCAGATCAT CGCGCACAAC ACGCGCAAGG CGTTCGCCGA GGCGCTGGGC
ATGCGCGAAG AGGACATCGG GCTGCGGACG GTCTATGAAG TGGCACACAA CATCGCCAAG
ATCGAAGAGC ACACGATCGA CGGCGAGCGG CGGCGCGTGT GCGTCCACCG CAAAGGTGCA
ACGCGGGCTT TCCCGCCGGG CCATTCCCAG ATTCCGGCGG CCTACCGGAG TATCGGCCAG
CCCGTGCTGA TTCCGGGCGA CATGGGACGC TACTCCTACG TGCTGGTCGG CACCGAGCAG
GCCATGCAGG AGACGTTCGG CAGCACGTGC CACGGGGCCG GTCGCCAGCT CAGCCGGACG
AAGGCCAAGA AGGTAGCCAG TGGCCGCCAC GTGGCCGAGG AGTTGCGCGC CCGGGGTATC
ATCGTGCGGG GCGCTAGCAT CCGCACGATC AACGAGGAGA TTCCCGAAGC CTATAAAGAC
GTGGCCGAGG TGGTCGAGGT GTGCCATCGG GCGGGCATCT CCCGCAAGGT GGCGCAGCTC
CGGCCGATCG GCTGTATCAA AGGATAA
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| Protein sequence | MAELRFVKIH DYLWEIPRTG GMRVPARIYA SEKILRELKE DQAPQQAVNV AHLPGIVKYS
LAMPDIHWGY GFPIGGVAAF DLDEGVISPG GVGYDINCLT GEARVLHAHG YYRTIAEIVE
AGTNDPLCSY RFAVRRPESA RIIYRFGETP RTRVWRVWTR GGDTVEATED HPFWTPQGMV
PLRELRPGDR VAFCPFEGVP YEAPSSETIL SPEAFWEALR QLGIPDRGRR YRQLVRYLTR
RGLLPLRYDS PALPLLCKLL GYLLGDGTCY RERNGRIRLV AYGRAEDLEA MRHDLEALGV
RAARLRRRRR RHRVQTVYRP YAFEREEVSL HITSRAFALL LVALGMPIGD RTAQDFEAPA
WLERAPRWQK RLFLAGLFGA ELSAPRLMSG HARTFATPVL TLTKRAPFAE SGRRFLETLA
RWAAELGVRT QAIEARRELL ATGERVRWQW RMASDPASLR ALWGRIGYEY NFRRQHEAAC
ALQYVKYKEQ VVRQRQEAVR LLRRWRAAGV SVGEATRRLA DQDINRRFVE RTYYEQRGDT
PRIGDAVCSY AAFRRERQNG QEPLGCVWEE IVRIEPVERP ELRVYDLTVD HPDHNFIANG
FVVSNCGVRL LASRLTYEEV EPHLERLVEM LFRRVPTGVG ASGALRVSKQ ELRRVAVEGA
HWAVRHGFGS EVDLEFIEEN GRIEGADPAA VSERAYERGA DQLGTLGSGN HFLEVGYVAQ
IFDDEAARVM GLFPGQVTVI IHTGSRGFGY QICDDYLAVM DRALARYHIR LPDRQLACAP
LRSPEGQQYL AAMRCGINFA FANRQIIAHN TRKAFAEALG MREEDIGLRT VYEVAHNIAK
IEEHTIDGER RRVCVHRKGA TRAFPPGHSQ IPAAYRSIGQ PVLIPGDMGR YSYVLVGTEQ
AMQETFGSTC HGAGRQLSRT KAKKVASGRH VAEELRARGI IVRGASIRTI NEEIPEAYKD
VAEVVEVCHR AGISRKVAQL RPIGCIKG
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