Gene Rmar_0418 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0418 
Symbol 
ID8567052 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp459760 
End bp461562 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content65% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003289710 
Protein GI268315991 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACGATA AACCGACACG CGACGAAACA CGAGGGCTGG ACCGACGCCT GCTGTGGCGG 
CTGGCCGGCT ACCTGTGGCC TTACCGGGGC TGGGTGGCGC TGGCCTTCTG CACGGTCATG
GCCGAGGCGT TTCTGGGGCC GCTCCGGCCC AAACTGGTCC AGGTGGCCAT CGACCGCCAT
ATCGTCGAGG GCGACTGGAG CGGACTGCAG CAGATCATCC TGCTGCTCGT GGGCGTGCTC
GTCGTGGAGG CCGGCCTGTC GTTCGTGAAC GATTACCTGA CGCAATGGAT CGGCCAGCGG
GCAATCTACG ACATTCGCAC GAAGGTCTAT CGCCATATCC AGCGCCAGTC GCTGCGGTTT
TTCGACCGGA CGCCCGTCGG GCGACTCATC ACACGCGTCA CCAACGACGT CGAGTCGCTC
AGCGACATGC TCTCGGCCGG CGTGGTGCGT ATCCTGGGCG ACCTGTTCCG GATCGTCTTC
ATCGCCTCCT TCATGTTCAT GCTGGAATGG CGACTGGCGC TCGTGACGCT TGCGGTCATG
CCCCTCATGA TGGCGGCCGT GGCCTGGTTT CGACGCAAGG TGCGGGAGCA GTACCGCGAG
ACGCGGCGTC AGATCGCCCG GCTGAACGCC TTCCTGCAGG AGCACATCGG CGGCATGAAG
ATCGTGCAGC TCTTCAACCG CGAGGCCGAG GAGCTGCGCC GCTTTCGCGA GATCAACGAC
GCACACCGCC AGGCCCAGAT CAAGACGGTC TTCTACTTTG CGCTCTTCTG GCCGGCCGTG
CAACTGGTCT CCGACACGGC GCTGGGACTG GTACTCTGGG TGGGGGGCCT GCGGGCGCTC
GAAGGCACGC TGACGCTCGG TGTGCTGATT GCATTCATCC AGTACGTGCG CCAGTTCTTC
GAGCCGATTC GCAATCTGTC GGACCAGTAC AACATGCTGC AGAGCGCCAT GGCCGGGGCC
GAGCGCATCT TCGGATTGCT CGACCAGGAC ACGGCGCTGC CCGAGCCGGC CCACCCCGTG
CGCGTCGAGC GCCTGCGCGG CCACATCGAA TTCCGCAACG TCTGGTTCAC CTACGACGAG
CTGCCGACCG ACGGCCAAGA GCCCAACTGG GTGCTGCGCG ACGTGTCGTT CACCGTCGAG
CCCGGCCAGC ACCTGGCGAT CGTGGGGGCC ACCGGCGCCG GCAAGACCAC AATCATCAAC
CTGCTGCTGT GCTTCTATGA CGTGCAGCGC GGCCAGATTC TGGTGGACGG CCACGACGTG
CGCGACTATG CGCTGCGCGA CCTGCGTCGC CACATCGGCC TGGTGCTGCA GGACGTGTTT
CTTTTCTCCG GGACGGTACT CGACAACATC ACGCTGGGCG ATCCGTCCAT TCCTTTCGAG
AAGGTGCAGG AAGCGGCCCG GTTGATCGGG GCCGATCGGT TCATCGAACG TCTGCCCAAT
GGGTATTTCC AGGACGTACG GGAGCGTGGA CTGACGCTCT CGCACGGTCA GCGCCAGCTC
CTGTCGTTCG TGCGCGCGCT CGTCTACGAT CCCGAGGTGC TCGTGCTCGA CGAGGCGACC
TCCAGCGTCG ATACCGAGAC GGAGCAGCTC ATCCAGCGGG CCATGGAGAC GCTGCTGCGC
GGGCGTACGG CCATTATCAT CGCGCACCGG CTCTCGACCA TCCAGCACGC CGACCAGATT
CTGGTGATGC ACCGGGGCGA AATTCGCGAG CGCGGTACCC ATCAGGAGCT GCTGGCCCGC
GACGGCCTCT ACCGGAAGCT CTACGAGCTG CAGTTTATGG AGCAGGCCCG CTCGGCCGCC
TGA
 
Protein sequence
MDDKPTRDET RGLDRRLLWR LAGYLWPYRG WVALAFCTVM AEAFLGPLRP KLVQVAIDRH 
IVEGDWSGLQ QIILLLVGVL VVEAGLSFVN DYLTQWIGQR AIYDIRTKVY RHIQRQSLRF
FDRTPVGRLI TRVTNDVESL SDMLSAGVVR ILGDLFRIVF IASFMFMLEW RLALVTLAVM
PLMMAAVAWF RRKVREQYRE TRRQIARLNA FLQEHIGGMK IVQLFNREAE ELRRFREIND
AHRQAQIKTV FYFALFWPAV QLVSDTALGL VLWVGGLRAL EGTLTLGVLI AFIQYVRQFF
EPIRNLSDQY NMLQSAMAGA ERIFGLLDQD TALPEPAHPV RVERLRGHIE FRNVWFTYDE
LPTDGQEPNW VLRDVSFTVE PGQHLAIVGA TGAGKTTIIN LLLCFYDVQR GQILVDGHDV
RDYALRDLRR HIGLVLQDVF LFSGTVLDNI TLGDPSIPFE KVQEAARLIG ADRFIERLPN
GYFQDVRERG LTLSHGQRQL LSFVRALVYD PEVLVLDEAT SSVDTETEQL IQRAMETLLR
GRTAIIIAHR LSTIQHADQI LVMHRGEIRE RGTHQELLAR DGLYRKLYEL QFMEQARSAA