Gene Rmar_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0403 
Symbol 
ID8567037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp446721 
End bp447797 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content64% 
IMG OID 
ProductTIM-barrel protein, nifR3 family 
Protein accessionYP_003289695 
Protein GI268315976 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000189855 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATCG GGACGATCGA GCTGGGCGAG CGGCCTCTGT TTCTGGCGCC CATGGAGGAC 
GTGAGCGATC CGCCGTTCCG ACTGCTGTGC AAGCGCTACG GGGCCGACAT GGTGTTCACC
GAGTTCATCT CGTCCGGGGG TCTGGTGCAC GAGAGCGAGG ACGCCGTCAA AAAGCTGGAC
ATCTACGACG AGGAACGACC CGTCGGCATT CAGATTTTCG GGGGTGAGCT GGAGCAGGTG
CGTGAGGCCG CCCGCATCGT CGATCAGATC GGCCCGGACG TGATCGACAT CAACTTCGGG
TGTCCGGTGC GCAAGGTGGT CTGCAAAGAC GCCGGAGCCG GCGTGCTGCG CGACCTGAAC
AAGATGCGGG CGTTGACGGA GGCCGTTATT GAGGTTGCCA CGCGACCGGT GACGGTCAAG
ACCCGTCTGG GCTGGGACGA TCGCTCGATT CGCATTCTGG AGGTGGCCCG GATGCTGGAA
GATTGCGGCG TGCAGGCGCT CACCGTGCAC GCGCGCACGC GGGCGCAGAT GTACAAGGGA
TCGGCCCGCT GGGAATGGCT CCGGCGGCTC AAAGAACTCG GTCTCTCGAT TCCGATCATC
GGCAATGGCG ATGCGCTGAC GCCCGAGAAG GTCAAGCAGA TGTTCGACGA AACCGGCGTC
GATGGCGTGA TGATCGGGCG CGGGGCGATC GGCAACCCGT GGATTTTCCG GGATGCGAAG
ATCTACATGG AAACCGGCGA ACTTCCACCA CCGCCCTCGT GGGAGGAGCG TGTGCGGGTG
GTGGCCGAGC ACCTGGAGCT GAAGTGCCAG TGGCTGGGCG AGCGTAAAGG CGTGCTGGAG
ATGCGCCGCA TGTACGGCGG CTATTTCAAG GGCTTTCCGG GCGCCAGCCG GTTGCGACAG
CTTCTGATGG ACAAGGAAAC GAAAGCCGAG GTGCTGGAAA TCCTGCTGAA CTTCCGCCCG
GACGATCCCG AAATTCAGGT GGCCGTGCCA CGTGCGGTGC GGGCCGTACC GGTCGCGCTG
ACGGCCCGTT TGCCTGCGCC GACACGCCAG AAAGCGCAGA CCGCCGAAGC GGCATAA
 
Protein sequence
MRIGTIELGE RPLFLAPMED VSDPPFRLLC KRYGADMVFT EFISSGGLVH ESEDAVKKLD 
IYDEERPVGI QIFGGELEQV REAARIVDQI GPDVIDINFG CPVRKVVCKD AGAGVLRDLN
KMRALTEAVI EVATRPVTVK TRLGWDDRSI RILEVARMLE DCGVQALTVH ARTRAQMYKG
SARWEWLRRL KELGLSIPII GNGDALTPEK VKQMFDETGV DGVMIGRGAI GNPWIFRDAK
IYMETGELPP PPSWEERVRV VAEHLELKCQ WLGERKGVLE MRRMYGGYFK GFPGASRLRQ
LLMDKETKAE VLEILLNFRP DDPEIQVAVP RAVRAVPVAL TARLPAPTRQ KAQTAEAA