| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0359 |
|---|
| Symbol | |
|---|
| ID | 8566992 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 399554 |
|---|
| End bp | 400456 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003289651 |
|---|
| Protein GI | 268315932 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGAGC TTCGAGCGAC ATTACGGCGC CTGCAGATCC GCCTGCGTGG CGAGCGGAGC
GGCTACGTGC TCGTGGCCCC CTACCTGCTG CACATGGCCG TGTTTTTCGG CTATCCGCTG
CTGTTCGCGT TTGTGCTGAT GTTTCATCGT TGGGACATCG TCACGCCCAT GGAGTTCGTG
GGGTTGAAGA ACTTCGTGCG GCTGGTGCGG GACGATCTCT TTTTCCGGGC GCTGCTCAAC
ACGGGTATTT TTCTGACCAT CCACATTCCG CTGCAGATCA TTGTGGCGCT GTTTTTTGCG
GAGCTGCTGA ATCGTCCGCT CAGGGGGCGG GGCTTTTTCC GCGCGGCCTA CTTCATGCCC
GTGGTGGTTT CGGGGGTGGT CATCACGATC CTGTTTCAGC AACTGTTTGC CTTCGACACC
GGACTGATCA ACCGGATGAT CCGGGCGCTG GGTGGGGAGC CGGTGCCCTG GCTCGTGTCG
CCGGCGCTAG CCATGCCTTC GATTGCCCTG ATGGCGACCT GGAAGAACGT GGGACTCTAC
ATCGTGCTGT TTCTGGCCGG GTTGCAGCAC ATCCCGAAGC ACCTGTACGA GGCGGCCGAA
CTGGACGGGG CCAACGCCTG GCAACGCTGG TGGCACGTGA CGCTCCCCAT GCTGAACCCC
ACGATGGTCA CGGTGGTGGT GCTCTCGACG ATCGGCGGGT TTTCGCTGTT CATCGAACCC
TACATCCTGA CGGGCGGCGG ACCGCTCAAC GCCACGCTTT CGGCCGTGCT CTACATCTAC
AACCAGGCTT TCTACTTCAA CCACATGGGC TATGCGGCCG CACTGGGCTT CTGCTTTGCC
ATCGTGATCT TCGTCGTGGT GCTGTTGCAG CGACGCTTTG TGGAAACCGA CACCTGGAGC
TGA
|
|---|
| Protein sequence | MPELRATLRR LQIRLRGERS GYVLVAPYLL HMAVFFGYPL LFAFVLMFHR WDIVTPMEFV
GLKNFVRLVR DDLFFRALLN TGIFLTIHIP LQIIVALFFA ELLNRPLRGR GFFRAAYFMP
VVVSGVVITI LFQQLFAFDT GLINRMIRAL GGEPVPWLVS PALAMPSIAL MATWKNVGLY
IVLFLAGLQH IPKHLYEAAE LDGANAWQRW WHVTLPMLNP TMVTVVVLST IGGFSLFIEP
YILTGGGPLN ATLSAVLYIY NQAFYFNHMG YAAALGFCFA IVIFVVVLLQ RRFVETDTWS
|
|---|
| |