Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0326 |
Symbol | |
ID | 8566957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 353977 |
End bp | 357531 |
Gene Length | 3555 bp |
Protein Length | 1184 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003289619 |
Protein GI | 268315900 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.253006 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCGGG AGCCAGGTAC GCATCTCGTT GCACATGGCT ATGAGCGCGC GACGTTGCTC GCGTTGTTGA AAAAGACCGG GCGTTTTCGA GAGGATCTGA CGGGGAACGC CTCCGCTGCA CCGCCGCGGG CACAGGTGCT GGGCGTTTGG GAGCTTGAGG ATATAGCTGT TCCGGTGTTG GAGGTGCCGG TTGAAGATGC CGAGCGTAAG CGATGGAGCG ACTGGGAAGC TGTGTGCGCC TGGTTGCGTG CGCAACAGGG TGAAGCCGCA CTATGTGTGT TTTACGATGC GCGCAGGGCG TTTCGTCTGG CTTTGATAGG CCCACGTTCT GGGAAGGCAC GTCCCCCCGT ATCGGGAAAT TTCCGACGCT GGAGCCTGCT GGTGCAGCCG GGTTATCCCA ATCGAACCTT TAGCGAACGC GTACCCCTGT TGATGCGGGC GGATAGCCGG GAGGCTTTGC TAGAAGTTTT CGATGCGGAA GCCGTTGGAC ATGCTTTCTA CGCAGCCTAT GTAAAGATTT TTCAGGAGAG CGTAGTCTCC GGTATCTATG GGGAAGGCTC CCGGCAAGAA TATCAGGATT GTTTCCTGGC CTTTACCGTA CGGGTGTTGT TTTTGAGCTT TGTGGCCAAA AAGGGATGGC TTGGGGATCA GGGGGCACGT TTTTTGCCCT GGCTCCTGGA ACGCTACCAG ACGGTCGCTC AGCAAGAGGA GGCGACCGGT TTCTACAACA GGTGGCTTCG GCCGCTGTTT TTTGAGGCGT TTCGTGCAGC TCCTTCGGCC AAAACGGCAC GTTTCCGTAC GCTTCCCGAA GACATCGCGA TCATCTACCG AGACGCCCCT TTCCTCAACG GGGAGCTGTT TCGCCGTCAA CCCTTCGATG CCCGTCTTGC GCTTACCGAT GAGGCGATTG CCCGGTTTTT TTCCTTGCTC TATGGGTACA ATTTTATTCT TGAAGAAAGC ACGCATGAGG ACGTCGATCT GGAGCTGACG CCTGAACTGC TGGGCCTAAT CCTGGAGCAG CTCATCAATG GGGTGGGCAT TACCGGAGCG AAAGAACAGG TGGGGGCCCA CTATACGCCC CGGGTCGAAG TCGATCTGAT GGTGCGGCTG GCGCTGATGG AAGCGCTGGT GCAGCGTGCG GTGCTGGATC GAGCGGCGGC GGCCCGCTTT GTGTTCGAAG GGAAGCTTGA GAGCGATCAG GCGCTGGCGG TACGCAAAAC GCTGGAAGAT CTCAAAGTAC TTGATCCGGC GGTTGGCTCC GGTGCCTTTC TGGTCGGCAT GCTTCAGGTG CTGGAAGAAC TACTGGACCG CACCCATGAA AGCCTTGGAG ATCGGTGTGC GGACCGGGTG CAACGACGGC GCCGCTTGAT CGCCGAGGTG CTGCATGGCG TGGATGTGCT GCGCTGGGCG GTATGGATGA CCGAACTGCG GCTCTGGCTG GCCCTCCTTG TCGATTTAGA CGACAGGGTG CGGCATACTT CAGGACCGAT TCTTCCCAGT CTGGGTCTGC GCGTTGTGCA GGGCGATGCG CTGATCCAGC GGATCGGCAA GCGGCTGCTC CCGATGCGTC CCGACGGGCC GCTGTGGAAT CGCCCGGAAA TCAGAGCACC GCTCCAACAG CTCAACGAAT ACCGCCGCGC TTACTTTGAA AATAAGGCGT CGCTGGAGCA GGTGCGTGCC GCCGAAACAG CCCTCTTTCA GGCGATGGTG CAGCAGGAGC GTCGCAGGTT GCAGCAACAG GCCAGCAGCA CGGGCGAACT GTTCCAGAAA GCGCGCTGCA GGTCAGACGA TGCAGCAACG CAGCAGCAAT TGACAGCGCT ACAGGAGCTG CTGGATGCTG CAGCCGCGGG GCACCGTCCC TTCGTCTGGT GGGTGGATTT TTCCGATGTG ATGGTAGAAC GAGGCGGTTT TGATGTGGTG ATCGGTAATC CTCCGTATGT GCGCCAGGAG CAGATTTCGG ATGTACTGGG TGACCTTACG CCCTCGGCTT ACAAAGCAAT GCTGGCGGCC GCTTACCGAA TGGACTGGGA GGCAATCGCC GGTTCACGTT TGCCTGCAGT GCAGCGGCGC GCTGACCTTT ACGTCTACTT CTATGTCCGT TCACTGCGGC TGCTGAACGA TCGAGGGGTG CACGTTTTTA TCGCGTCGAA TTCCTGGCTC GATGTAGACT TCGGGAGCTG GCTGCAGGAG TTGTTTCTGC GATATGCGCC CCTGCGGCTT GTGCTGGAAA ATCGTAGCTA TCGCTCTTTT GCCGCCGGTA TCAACACCGC CATCACGGTA GCACTCGCTC CCCGTCCGAT TGTGCATCGT GAGCCGGTGC GTTTCTGCGC GCTTTACAGA GCCTTTGAAG AGGTACATCC GGCTGATATC CTCCAGATCG TAGAGGCTAC GCAGGATCTG CGTCAGGAAG CCTTCCGCGT GCTCGTGCGG GCGCCGAACG TGCTGTTGCA AGAAGCCGGG CGAACCGGAA AGTACTCGGG GAGCAAGTGG GGGGGCAAGT ACCTGCGGGC TCCCGACATC TTTTACACCC TTTTTGAGCA GGGCCAGCGT CGGTGGGTGC GATTGGGAGA GATAGCCGAA GTGCGGCGTG GCATTACGAC GGGCGTCAAC GAGTTTTTCT ATCTGGAGCC TGTAGGACAG ACGGTCGAGG AGGTCGCAAC GCTCGCAAAA CAGGACCCAG CGGCACGTGT GCCGGTGCGG AACAGCCTCG GGTGGGAAGG GCGCCTTGAG GCCGCCTGGT TGCGTCCCAT CATCAAAAGC TCGCGAGAAA TCCGCACGTT AAAGGTTGGT CTGGAAAATC TGCGATATCT GGTATTGATG CCTCCTGAGG AGGTGCGCGC TCATCTTGAG GCGAATCTGG ATCCGCCACT TGCCCGGTAT CCCGGTATCC TCGACTATAT CCGATGGGGG GAAACCCGGG GCTATCCGAA GCGCCCCACG TGTAGCAGCC GCCGGTGGTG GTGGGATCTC GGCGAGCGGC CGATCGGTCA GGTGCTTTGC ATGATGACCT ACAACGATCG GCATCCATTC TGGGTCAATA CGGTCGCGTT GAGCGATAAC CGGCTCTACG ATCTCTATGT GAAGACGACC GACCCGCTGC TTCTGGCCGC GCTGATGAAT ACCACGCTTG TCCCTCTACA GATGGAACTT CTGGGACGCA TCAACCTGGG TGAAGGGGCG TTGGATTTCA AAGTGTACGA GGCGGCCGAG CTGCTGTGTC CCGCCCCGGA CGTGCTTTCG AGCGACGAGC AGGCCCGGCT GCTAACCGCA TTTCAGGCGA TGGTAGATCG GCCCGTCCGC AGTCTTTTTG AGGAGCTGGG TTTTCCACGG TGCCGCCGTT CCCGATGCGC CCATCCTGAT CATCCGTATG AGCACGTGGT GCCGGAGATG CTGACGCTGG ACCAGGTACG ACAGGCTTCC CCCGAGCGCT TTCAGATGGA CACGGTGGTA TGCCGGGCAC TGGGGCTGAA CGATAGGGAA CAGCTTGAAG TGTATCGCGC CGTCACGCAG CTTGTGCTCG AACGATTGCG TCGGGCGCGC ACGGCGCACC CCTGA
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Protein sequence | MSREPGTHLV AHGYERATLL ALLKKTGRFR EDLTGNASAA PPRAQVLGVW ELEDIAVPVL EVPVEDAERK RWSDWEAVCA WLRAQQGEAA LCVFYDARRA FRLALIGPRS GKARPPVSGN FRRWSLLVQP GYPNRTFSER VPLLMRADSR EALLEVFDAE AVGHAFYAAY VKIFQESVVS GIYGEGSRQE YQDCFLAFTV RVLFLSFVAK KGWLGDQGAR FLPWLLERYQ TVAQQEEATG FYNRWLRPLF FEAFRAAPSA KTARFRTLPE DIAIIYRDAP FLNGELFRRQ PFDARLALTD EAIARFFSLL YGYNFILEES THEDVDLELT PELLGLILEQ LINGVGITGA KEQVGAHYTP RVEVDLMVRL ALMEALVQRA VLDRAAAARF VFEGKLESDQ ALAVRKTLED LKVLDPAVGS GAFLVGMLQV LEELLDRTHE SLGDRCADRV QRRRRLIAEV LHGVDVLRWA VWMTELRLWL ALLVDLDDRV RHTSGPILPS LGLRVVQGDA LIQRIGKRLL PMRPDGPLWN RPEIRAPLQQ LNEYRRAYFE NKASLEQVRA AETALFQAMV QQERRRLQQQ ASSTGELFQK ARCRSDDAAT QQQLTALQEL LDAAAAGHRP FVWWVDFSDV MVERGGFDVV IGNPPYVRQE QISDVLGDLT PSAYKAMLAA AYRMDWEAIA GSRLPAVQRR ADLYVYFYVR SLRLLNDRGV HVFIASNSWL DVDFGSWLQE LFLRYAPLRL VLENRSYRSF AAGINTAITV ALAPRPIVHR EPVRFCALYR AFEEVHPADI LQIVEATQDL RQEAFRVLVR APNVLLQEAG RTGKYSGSKW GGKYLRAPDI FYTLFEQGQR RWVRLGEIAE VRRGITTGVN EFFYLEPVGQ TVEEVATLAK QDPAARVPVR NSLGWEGRLE AAWLRPIIKS SREIRTLKVG LENLRYLVLM PPEEVRAHLE ANLDPPLARY PGILDYIRWG ETRGYPKRPT CSSRRWWWDL GERPIGQVLC MMTYNDRHPF WVNTVALSDN RLYDLYVKTT DPLLLAALMN TTLVPLQMEL LGRINLGEGA LDFKVYEAAE LLCPAPDVLS SDEQARLLTA FQAMVDRPVR SLFEELGFPR CRRSRCAHPD HPYEHVVPEM LTLDQVRQAS PERFQMDTVV CRALGLNDRE QLEVYRAVTQ LVLERLRRAR TAHP
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