Gene Rmar_0326 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0326 
Symbol 
ID8566957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp353977 
End bp357531 
Gene Length3555 bp 
Protein Length1184 aa 
Translation table11 
GC content59% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003289619 
Protein GI268315900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.253006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCGGG AGCCAGGTAC GCATCTCGTT GCACATGGCT ATGAGCGCGC GACGTTGCTC 
GCGTTGTTGA AAAAGACCGG GCGTTTTCGA GAGGATCTGA CGGGGAACGC CTCCGCTGCA
CCGCCGCGGG CACAGGTGCT GGGCGTTTGG GAGCTTGAGG ATATAGCTGT TCCGGTGTTG
GAGGTGCCGG TTGAAGATGC CGAGCGTAAG CGATGGAGCG ACTGGGAAGC TGTGTGCGCC
TGGTTGCGTG CGCAACAGGG TGAAGCCGCA CTATGTGTGT TTTACGATGC GCGCAGGGCG
TTTCGTCTGG CTTTGATAGG CCCACGTTCT GGGAAGGCAC GTCCCCCCGT ATCGGGAAAT
TTCCGACGCT GGAGCCTGCT GGTGCAGCCG GGTTATCCCA ATCGAACCTT TAGCGAACGC
GTACCCCTGT TGATGCGGGC GGATAGCCGG GAGGCTTTGC TAGAAGTTTT CGATGCGGAA
GCCGTTGGAC ATGCTTTCTA CGCAGCCTAT GTAAAGATTT TTCAGGAGAG CGTAGTCTCC
GGTATCTATG GGGAAGGCTC CCGGCAAGAA TATCAGGATT GTTTCCTGGC CTTTACCGTA
CGGGTGTTGT TTTTGAGCTT TGTGGCCAAA AAGGGATGGC TTGGGGATCA GGGGGCACGT
TTTTTGCCCT GGCTCCTGGA ACGCTACCAG ACGGTCGCTC AGCAAGAGGA GGCGACCGGT
TTCTACAACA GGTGGCTTCG GCCGCTGTTT TTTGAGGCGT TTCGTGCAGC TCCTTCGGCC
AAAACGGCAC GTTTCCGTAC GCTTCCCGAA GACATCGCGA TCATCTACCG AGACGCCCCT
TTCCTCAACG GGGAGCTGTT TCGCCGTCAA CCCTTCGATG CCCGTCTTGC GCTTACCGAT
GAGGCGATTG CCCGGTTTTT TTCCTTGCTC TATGGGTACA ATTTTATTCT TGAAGAAAGC
ACGCATGAGG ACGTCGATCT GGAGCTGACG CCTGAACTGC TGGGCCTAAT CCTGGAGCAG
CTCATCAATG GGGTGGGCAT TACCGGAGCG AAAGAACAGG TGGGGGCCCA CTATACGCCC
CGGGTCGAAG TCGATCTGAT GGTGCGGCTG GCGCTGATGG AAGCGCTGGT GCAGCGTGCG
GTGCTGGATC GAGCGGCGGC GGCCCGCTTT GTGTTCGAAG GGAAGCTTGA GAGCGATCAG
GCGCTGGCGG TACGCAAAAC GCTGGAAGAT CTCAAAGTAC TTGATCCGGC GGTTGGCTCC
GGTGCCTTTC TGGTCGGCAT GCTTCAGGTG CTGGAAGAAC TACTGGACCG CACCCATGAA
AGCCTTGGAG ATCGGTGTGC GGACCGGGTG CAACGACGGC GCCGCTTGAT CGCCGAGGTG
CTGCATGGCG TGGATGTGCT GCGCTGGGCG GTATGGATGA CCGAACTGCG GCTCTGGCTG
GCCCTCCTTG TCGATTTAGA CGACAGGGTG CGGCATACTT CAGGACCGAT TCTTCCCAGT
CTGGGTCTGC GCGTTGTGCA GGGCGATGCG CTGATCCAGC GGATCGGCAA GCGGCTGCTC
CCGATGCGTC CCGACGGGCC GCTGTGGAAT CGCCCGGAAA TCAGAGCACC GCTCCAACAG
CTCAACGAAT ACCGCCGCGC TTACTTTGAA AATAAGGCGT CGCTGGAGCA GGTGCGTGCC
GCCGAAACAG CCCTCTTTCA GGCGATGGTG CAGCAGGAGC GTCGCAGGTT GCAGCAACAG
GCCAGCAGCA CGGGCGAACT GTTCCAGAAA GCGCGCTGCA GGTCAGACGA TGCAGCAACG
CAGCAGCAAT TGACAGCGCT ACAGGAGCTG CTGGATGCTG CAGCCGCGGG GCACCGTCCC
TTCGTCTGGT GGGTGGATTT TTCCGATGTG ATGGTAGAAC GAGGCGGTTT TGATGTGGTG
ATCGGTAATC CTCCGTATGT GCGCCAGGAG CAGATTTCGG ATGTACTGGG TGACCTTACG
CCCTCGGCTT ACAAAGCAAT GCTGGCGGCC GCTTACCGAA TGGACTGGGA GGCAATCGCC
GGTTCACGTT TGCCTGCAGT GCAGCGGCGC GCTGACCTTT ACGTCTACTT CTATGTCCGT
TCACTGCGGC TGCTGAACGA TCGAGGGGTG CACGTTTTTA TCGCGTCGAA TTCCTGGCTC
GATGTAGACT TCGGGAGCTG GCTGCAGGAG TTGTTTCTGC GATATGCGCC CCTGCGGCTT
GTGCTGGAAA ATCGTAGCTA TCGCTCTTTT GCCGCCGGTA TCAACACCGC CATCACGGTA
GCACTCGCTC CCCGTCCGAT TGTGCATCGT GAGCCGGTGC GTTTCTGCGC GCTTTACAGA
GCCTTTGAAG AGGTACATCC GGCTGATATC CTCCAGATCG TAGAGGCTAC GCAGGATCTG
CGTCAGGAAG CCTTCCGCGT GCTCGTGCGG GCGCCGAACG TGCTGTTGCA AGAAGCCGGG
CGAACCGGAA AGTACTCGGG GAGCAAGTGG GGGGGCAAGT ACCTGCGGGC TCCCGACATC
TTTTACACCC TTTTTGAGCA GGGCCAGCGT CGGTGGGTGC GATTGGGAGA GATAGCCGAA
GTGCGGCGTG GCATTACGAC GGGCGTCAAC GAGTTTTTCT ATCTGGAGCC TGTAGGACAG
ACGGTCGAGG AGGTCGCAAC GCTCGCAAAA CAGGACCCAG CGGCACGTGT GCCGGTGCGG
AACAGCCTCG GGTGGGAAGG GCGCCTTGAG GCCGCCTGGT TGCGTCCCAT CATCAAAAGC
TCGCGAGAAA TCCGCACGTT AAAGGTTGGT CTGGAAAATC TGCGATATCT GGTATTGATG
CCTCCTGAGG AGGTGCGCGC TCATCTTGAG GCGAATCTGG ATCCGCCACT TGCCCGGTAT
CCCGGTATCC TCGACTATAT CCGATGGGGG GAAACCCGGG GCTATCCGAA GCGCCCCACG
TGTAGCAGCC GCCGGTGGTG GTGGGATCTC GGCGAGCGGC CGATCGGTCA GGTGCTTTGC
ATGATGACCT ACAACGATCG GCATCCATTC TGGGTCAATA CGGTCGCGTT GAGCGATAAC
CGGCTCTACG ATCTCTATGT GAAGACGACC GACCCGCTGC TTCTGGCCGC GCTGATGAAT
ACCACGCTTG TCCCTCTACA GATGGAACTT CTGGGACGCA TCAACCTGGG TGAAGGGGCG
TTGGATTTCA AAGTGTACGA GGCGGCCGAG CTGCTGTGTC CCGCCCCGGA CGTGCTTTCG
AGCGACGAGC AGGCCCGGCT GCTAACCGCA TTTCAGGCGA TGGTAGATCG GCCCGTCCGC
AGTCTTTTTG AGGAGCTGGG TTTTCCACGG TGCCGCCGTT CCCGATGCGC CCATCCTGAT
CATCCGTATG AGCACGTGGT GCCGGAGATG CTGACGCTGG ACCAGGTACG ACAGGCTTCC
CCCGAGCGCT TTCAGATGGA CACGGTGGTA TGCCGGGCAC TGGGGCTGAA CGATAGGGAA
CAGCTTGAAG TGTATCGCGC CGTCACGCAG CTTGTGCTCG AACGATTGCG TCGGGCGCGC
ACGGCGCACC CCTGA
 
Protein sequence
MSREPGTHLV AHGYERATLL ALLKKTGRFR EDLTGNASAA PPRAQVLGVW ELEDIAVPVL 
EVPVEDAERK RWSDWEAVCA WLRAQQGEAA LCVFYDARRA FRLALIGPRS GKARPPVSGN
FRRWSLLVQP GYPNRTFSER VPLLMRADSR EALLEVFDAE AVGHAFYAAY VKIFQESVVS
GIYGEGSRQE YQDCFLAFTV RVLFLSFVAK KGWLGDQGAR FLPWLLERYQ TVAQQEEATG
FYNRWLRPLF FEAFRAAPSA KTARFRTLPE DIAIIYRDAP FLNGELFRRQ PFDARLALTD
EAIARFFSLL YGYNFILEES THEDVDLELT PELLGLILEQ LINGVGITGA KEQVGAHYTP
RVEVDLMVRL ALMEALVQRA VLDRAAAARF VFEGKLESDQ ALAVRKTLED LKVLDPAVGS
GAFLVGMLQV LEELLDRTHE SLGDRCADRV QRRRRLIAEV LHGVDVLRWA VWMTELRLWL
ALLVDLDDRV RHTSGPILPS LGLRVVQGDA LIQRIGKRLL PMRPDGPLWN RPEIRAPLQQ
LNEYRRAYFE NKASLEQVRA AETALFQAMV QQERRRLQQQ ASSTGELFQK ARCRSDDAAT
QQQLTALQEL LDAAAAGHRP FVWWVDFSDV MVERGGFDVV IGNPPYVRQE QISDVLGDLT
PSAYKAMLAA AYRMDWEAIA GSRLPAVQRR ADLYVYFYVR SLRLLNDRGV HVFIASNSWL
DVDFGSWLQE LFLRYAPLRL VLENRSYRSF AAGINTAITV ALAPRPIVHR EPVRFCALYR
AFEEVHPADI LQIVEATQDL RQEAFRVLVR APNVLLQEAG RTGKYSGSKW GGKYLRAPDI
FYTLFEQGQR RWVRLGEIAE VRRGITTGVN EFFYLEPVGQ TVEEVATLAK QDPAARVPVR
NSLGWEGRLE AAWLRPIIKS SREIRTLKVG LENLRYLVLM PPEEVRAHLE ANLDPPLARY
PGILDYIRWG ETRGYPKRPT CSSRRWWWDL GERPIGQVLC MMTYNDRHPF WVNTVALSDN
RLYDLYVKTT DPLLLAALMN TTLVPLQMEL LGRINLGEGA LDFKVYEAAE LLCPAPDVLS
SDEQARLLTA FQAMVDRPVR SLFEELGFPR CRRSRCAHPD HPYEHVVPEM LTLDQVRQAS
PERFQMDTVV CRALGLNDRE QLEVYRAVTQ LVLERLRRAR TAHP