Gene Rmar_0311 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0311 
Symbol 
ID8566941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp336639 
End bp337841 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content62% 
IMG OID 
ProductATP synthase F0, A subunit 
Protein accessionYP_003289604 
Protein GI268315885 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00150281 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTGATC GTACGCACAT TCAGCAGGGG TGGCGTCGGA CCGGTCTGTG GCTTGCCGTC 
GTCGCGTTGT TCGGATTGAT ACCGCGTCCG CTGCTGGCCG CCGAAGAGGG CGAAGGGAAC
GAGAACATCA GCGAGGTGCT TATCCATCAT ACAGCCGATG GTTACTACGT CGCGCTGGAG
CCTTTCGTGA CGATTGAGTT GCCCCGGATC TTCCTGGTGC GCACGTCCGA GGGCTCTTGG
CGACTGGACG CCTTCGGCAG CACGGCCTCG GCGCTGCACT CCGGTCGCTA CGTGGCCGAC
TACGAGGGAC ATCGCTACGA GTCGTCCGCC GAACTGGAAG AGCTGATCGC GGCACATCAT
CACCTCTATG CCGAACTGCA TCCGCGCGAG GGCGAGCTGG TGCTGGATCT GTCGATCACC
CGCCACTACG TGTTCGGCCT GATCGCCGCC CTGCTGGTGC TGGCGCTGTT CATTCCGGTC
GCGCAACGCT ATCGCAAAGG GATTGGCCGC ACCACGGCAC CGCGGGGCGT GCTGCAGAAT
CTGGCCGAGG TGTTCATCGT TTTTGTCCGC GACGAGATCG CCCGGCCCAA CATCGGCGAG
AAGGCCGACC GCTTTCTGCC CTACCTGCTG ACGGCCTTCT TCTTTATCCT GTTCTGCAAT
CTGCTCGGCC TGGTGCCCAA CCTGGGCGCC GCCACTTCGA ACCTGGCCGT CACGGGCGTG
CTGGCGCTGT TTACGTTCAT CATCGGCACG ATCTACGCCT CGAAGGATCA CTGGAAGCAC
ATTTTCTGGC CGCCCGGCGT GCCTGTTTTC GTCAAGCCGA TTCTGATTCC CGTGGAAATC
ATGGGGCTGT TCACCCGGCA CGCGGCGTTG GCCATCCGTC TGTTTGCCAA CATGACGGCC
GGCACGCTGG TGATCCTGAG CCTGATCGGC CTGATCTTCA TGATCAACGC GCTGTTCGGG
GCACTGGTGG CCTGGATGAG CACGCTGCCG AGTGTGCTGC TGACGCTGTT TATCTCGGCC
ATCAAGCTGC TGGTGGCCTT CATTCAGGCG TACGTCTTTA CGCTGCTTTC GGCGCTCTTC
ATCGGCATGT CGGTGGCCGA GCACGATCAT GAACATCACG AGCATGAAGA GGAAGCGGGC
AACGAGCCGG TCGTGCATGC GGTGCCGACC TCCGATGGGG CGCGTGTGGT CGTCCATGGA
TAA
 
Protein sequence
MGDRTHIQQG WRRTGLWLAV VALFGLIPRP LLAAEEGEGN ENISEVLIHH TADGYYVALE 
PFVTIELPRI FLVRTSEGSW RLDAFGSTAS ALHSGRYVAD YEGHRYESSA ELEELIAAHH
HLYAELHPRE GELVLDLSIT RHYVFGLIAA LLVLALFIPV AQRYRKGIGR TTAPRGVLQN
LAEVFIVFVR DEIARPNIGE KADRFLPYLL TAFFFILFCN LLGLVPNLGA ATSNLAVTGV
LALFTFIIGT IYASKDHWKH IFWPPGVPVF VKPILIPVEI MGLFTRHAAL AIRLFANMTA
GTLVILSLIG LIFMINALFG ALVAWMSTLP SVLLTLFISA IKLLVAFIQA YVFTLLSALF
IGMSVAEHDH EHHEHEEEAG NEPVVHAVPT SDGARVVVHG