Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0281 |
Symbol | |
ID | 8566911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 299859 |
End bp | 302717 |
Gene Length | 2859 bp |
Protein Length | 952 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | TonB-dependent receptor |
Protein accession | YP_003289575 |
Protein GI | 268315856 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAC AGGCTATTAT AAGTAAAGCG CTTATATTTT TCGCTGGACT ACTGCTGGTC GGCGGGCCGA TCGGTTCGGC CCTGGCGCAG ACCACGGGCA AAATCACCGG CCGCGTCATC GATGCGGCCA CGGGCGCGCC GCTGCCCGGC GTGAGCGTTT ACATCGAGGG CACCACGCTG GGCGCCGCCA CGGACGTCGA CGGCGAGTAT GTGATCATCG GCGTGCGGCC GGGCACCTAC ACCGTCGTGG CCTCCTTCGT GGGCTATGCC ACCGAGCGCC GCGAGGGCGT GCAGGTGGGC AGTGGCCTGA CCACGCGCGT CGACTTTGCA CTCCGCGAGG AGGTGATTCA GGGCGAAGAG ATCGTGGTGG TTGCGCCGCC CATCACCGTG CGCAAGGACC TGACCAGCTC CGAGGCGCGC GTGACGGCCG AGACGATCGA CCGCCTGCCC GTGCAGGAAG TCAGCCAGGT GCTGACGCTG CAGGCGGGCG TGACCGAACG CGGCGGGCTC CACATCCGCG GCGGCCGCGC CAGCGAAGTC GTCGTCATGG TCGACGGCGT GCCCGTCACG GACAACTTCG ACGGCTCGAC GGCCGTGCAG CTCGAAAACG AAGGGATCCA GGAGCTGCAG GTCATCTCGG GCACCTTCAA CGCCGAGTAC GGCAACGCCA TGTCGGGCGT GATCAACGTG GTGACGAAAG AAGGGCGCTC GGACCGATGG GCCGGTTCGA TCAAGACCTA CAGCGGTTCC TACCTGGTCT TCGGCGAAGG GGGCGAGGCT TACCTGCGCG GCGTCGAAGT GGAGCGCTAC ACGCGGCAGG GCATTCAGTA CCGAGACGTC GATCCCTACG GCTATCTGCC GATCAATCCC ACGCACTACT ACAACTTCGA GGCGGCCCTC GAGGGGCCGA TCTTCACGCC GCGGCTGACG CTTTTCGGGC TCGTCCGCTA CTTCCACAAC GACGGCTGGC TCTACGGCGC CCGCATGTTC AACATGGACG GCACCTACGG CGACTCGTCG CTGGTGCCCA TGAACACCTA CTCGAAACTG AGCTGGCAGG GTAACCTGCG CTTTCAGGTG ACGCCCAACC TGTTCCTGAA CCTGATCGGC CTTGGCTCGG TCACGCGCAG CCGACCCTAC GACCTCTACT GGCGCTGGAA TCCTGACGGT CGCACGCGCA ACTACGACCT GGGCTACAAC CTGAAGTTGC AGCTCAAGCA CCTGCTCAGC TCCCGCACCT TCTACACAGT CCATCTGGCC ACCTTCCGGC GGCACGCCTG GAGCCGACGG TTCGACGATC CGCTCGATCC ACGCTACAAC GGGCTGGCCA TCCTGACGCC GGACTCCATC GAAGTCGCGC CGGGCGTCTG GGTACCCTAC GTGACGGGTG GAGGACGCTT CGCCCGTGGG GGCATGGACA TGAACCACTT CGAGCGTACC TCGCAGGCTT ATTTTGCCAA GGCCGACCTG ACCAGCCAGG TGGCGCGCAA CCACCTGGTC AAGCTCGGCG CCGAGGTGCG CATCGACCGG CTGGACTTCA CGGCCTTCAG CCTGATTCCG GCCACCGACG CCGAGGGCAA CGTCATCCAG CCCTTCCAGC CGGCCATCCC GCCCGAGACG TCCCCGCAGT ACCAGCACTA CGAGGACGTT TCGCCGATCA CGGCCAGCGC CTACGTGCAG GACAAGATCG AATTCGAGGA CTTCGTCGTG AACGTGGGGC TTCGCTTCGA TTACTTCGAC GCCCGCACAC CGGTCCCGGC CGATCCTGAA GACCCGAACA TCTACTTTCC CTTCAAAAAA ATCCACATTT ACAGAGACCT GAACGGCGAC GGCGTGATCA CCGTCGATGA GGAGCGCGAG GACAATCGCT ACACGCTGGA AGAACGGGAG ACGTTCTGGT GGAAGGAGCC GAAACCCAAG TTTCAGCTTT CGCCCCGGCT GGGCATTTCC TATCCGATCA CCGAGGCCGG CGTGCTACAC TTTTCCTACG GGCACTTTCT CCAGATTCCC ACGCTGAACC TGCTTTTTGC CGGCTACGGC TACAAGATTC AGAACCAGTC GGGCCAGTAC GGGCCCTACG GCAATCCGGA CCTCGACGCG CAGCGGACCG TCATGTACGA GATCGGCTTC CGCCAGGGGC TGGGTCCCTT CCTGTTCGAC GTGACGGCCT ACTATCGGGA CGTACGCGAC TGGGTCTCGA CCTCCACGCC GATCGAAACG GAGATTCCCG GCGTCGTCTA TGTGATCTAC ACGAATCGCG ACTACGCGAG CACGCGCGGC GTGACGGCCA CCTTCTCGCG GCGCTTCGAG GACGGCTGGG GCTTCGACGT CAGCTACACC TACCAGGTGG CCGAAGGCTC CAACTCGAAC CCGGACGAAG AATTCTTCGC GCGGCTGAAC AACCAGCAAC CCACGCTGAC GCTGCTGCCG CTCGACTGGG ACCAGCGGCA CAAGGTGGCT GCCGCCTTCT ATCTGGGCGG AAAGAACTGG GGCGCCTCGA TGGTGAGCGT CTGGGGTTCC GGCTTCCCCT ACACGCCGTC GTTCCCCGAA GCGGCCATCG CCGGACCCGA CGTGCCCCCG ACCTTTCCGC GCAATGCACG CCGCATGCCG TCCACCTGGC AGGTGGACCT CTACGCCTAC CGGGACTTCG AGATCGCCGG GGTGCGGCCG CGTCTGTTCG TGCAGGTGTA CAACCTGCTG GATCGGCGCA ACCCGGTGGC CGTCTTCAGC GACACGGGGC GGCCCGACGT GACGCTGCCC CAGCAGCAGG CTGCCTCGTT CGATCCGGGC TACTTCGTCC GGCCCGAACA CTACAGCGAG CCCCGACGGC TTCACGTAGG ACTGGAACTG CGGTTTTGA
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Protein sequence | MKTQAIISKA LIFFAGLLLV GGPIGSALAQ TTGKITGRVI DAATGAPLPG VSVYIEGTTL GAATDVDGEY VIIGVRPGTY TVVASFVGYA TERREGVQVG SGLTTRVDFA LREEVIQGEE IVVVAPPITV RKDLTSSEAR VTAETIDRLP VQEVSQVLTL QAGVTERGGL HIRGGRASEV VVMVDGVPVT DNFDGSTAVQ LENEGIQELQ VISGTFNAEY GNAMSGVINV VTKEGRSDRW AGSIKTYSGS YLVFGEGGEA YLRGVEVERY TRQGIQYRDV DPYGYLPINP THYYNFEAAL EGPIFTPRLT LFGLVRYFHN DGWLYGARMF NMDGTYGDSS LVPMNTYSKL SWQGNLRFQV TPNLFLNLIG LGSVTRSRPY DLYWRWNPDG RTRNYDLGYN LKLQLKHLLS SRTFYTVHLA TFRRHAWSRR FDDPLDPRYN GLAILTPDSI EVAPGVWVPY VTGGGRFARG GMDMNHFERT SQAYFAKADL TSQVARNHLV KLGAEVRIDR LDFTAFSLIP ATDAEGNVIQ PFQPAIPPET SPQYQHYEDV SPITASAYVQ DKIEFEDFVV NVGLRFDYFD ARTPVPADPE DPNIYFPFKK IHIYRDLNGD GVITVDEERE DNRYTLEERE TFWWKEPKPK FQLSPRLGIS YPITEAGVLH FSYGHFLQIP TLNLLFAGYG YKIQNQSGQY GPYGNPDLDA QRTVMYEIGF RQGLGPFLFD VTAYYRDVRD WVSTSTPIET EIPGVVYVIY TNRDYASTRG VTATFSRRFE DGWGFDVSYT YQVAEGSNSN PDEEFFARLN NQQPTLTLLP LDWDQRHKVA AAFYLGGKNW GASMVSVWGS GFPYTPSFPE AAIAGPDVPP TFPRNARRMP STWQVDLYAY RDFEIAGVRP RLFVQVYNLL DRRNPVAVFS DTGRPDVTLP QQQAASFDPG YFVRPEHYSE PRRLHVGLEL RF
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