| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0241 |
|---|
| Symbol | |
|---|
| ID | 8566871 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 256092 |
|---|
| End bp | 257537 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | |
|---|
| Product | permease YjgP/YjgQ family protein |
|---|
| Protein accession | YP_003289535 |
|---|
| Protein GI | 268315816 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGGC TCCACCGCAT GACGCTCGGC ATGCTGCCCG GCCCGTTTCT GGGCTGGTTC
GGCACGCTGA TGTTTCTCCT TATCATGCAA TTTCTCATCA AGTACCTGCC CGATCTGGTC
GGCAAAGGCC TGCCGCTGGG CGTCATCCTG GAGCTGATCA GCTACAACCT GGCTTACATG
GTGGTGCTGG CCGTGCCCAT GGCCACGCTG ATCGCCATGA TCATGACGTT CGGGCGGCTG
GCCGAGTCAA ACGCCTATCA GGTGATCAAA AGTGCGGGCA TCTCGCTGCC GCAACTGACC
TGGCCGCTGC TCATCGTGGG GCTGGTGCTC ACCGGCGCCA TGATGTACTT CAACAACCTG
ATCCTGCCCG AGGCCAATCA CCGCGCCCGC AACCTCTGGA TCGACATCCA GCGCAAAAAG
CCCGGCTTTC AGCTCCAGCC CGGTGTCTTC TACGACGGGA TCGAAGGCTA CAGCATCCTC
GTGCAGCATC GCGATCCCGA AACCGACTCG CTGCGGGACG TGACGATCTA CGACTACCGC
AACAGCGGCG AACATGCCGT GCTGAAGGCG CAACGGGGCC TGCTTCAACC CATCGCAGGC
GGACGCTTCA TCGATCTGAT TCTGGAAGAC GGCGAATTTC ACCGACTGCG TCGCCTCGAA
GGACAGGAGC GGTACGAACG GCTGGCGTTT GCCCGCTACC GGCTGCGGCT GGACCTGTCG
GACTTCGTGT TCACCCGGAG CCAGGAAGAA GGCTACCGCA CCGACCGCAC GACGCCCACG
CCCCAGATGC TGGCGCTGGT CGATTCGATG GCGGCGGAAG TGCAGCGCAA CCGGGCCCGC
ATTCGCCAGC TCCTGCTGCG CGTGCTGGGC GACACGGTGA GCGCTGCGCC TGCACCTGAA
CCGCCGCCTC TACAACGGGC TGCAGCCGAC TCCGCCCGTC AGGCCACGCG ACCGGCCCTT
CGGGGTCTTT CGGAAAGCCA GCGGGCCACG CTCTACGAAC TGGCCCTCCA GCAAACCCGC
CGGCTTCAGA CCGAGATCGA AGACCTGCAG CGTTCGATTC AGTGGACCGA GCGGCGCGCC
GACCGCTACC GCGTCGAGAT CCACAAGAAG TTTTCCATTG CGGTCGCCTG TCTGATCTTT
GTGCTCATCG GCATGCCGCT GGGGCTGAGC GTACGTCGGG GCGGCCTGGG ACTGGCCGGC
GGTCTGGCGC TGGCAATTTT TCTGTTCTAC TGGATCACGC TCGTGCAGGG CGAAAAGCTG
GCCGACCGGG GCTATCTGAC CCCCTGGATC GGCATGTGGC TGCCCAATCT GGTGATGGGG
TTGCTCGGGG TGGCGCTGTT CGTGTACGTT TCGTTCGACC TGCGCGTGAC GCGCCCACTG
ACCTGGCTGA CCTGCAAACT CAAGGCGCTG CGCCATGCTC TATCTCGTTC CTACGCCCAT
CGGTAA
|
|---|
| Protein sequence | MKRLHRMTLG MLPGPFLGWF GTLMFLLIMQ FLIKYLPDLV GKGLPLGVIL ELISYNLAYM
VVLAVPMATL IAMIMTFGRL AESNAYQVIK SAGISLPQLT WPLLIVGLVL TGAMMYFNNL
ILPEANHRAR NLWIDIQRKK PGFQLQPGVF YDGIEGYSIL VQHRDPETDS LRDVTIYDYR
NSGEHAVLKA QRGLLQPIAG GRFIDLILED GEFHRLRRLE GQERYERLAF ARYRLRLDLS
DFVFTRSQEE GYRTDRTTPT PQMLALVDSM AAEVQRNRAR IRQLLLRVLG DTVSAAPAPE
PPPLQRAAAD SARQATRPAL RGLSESQRAT LYELALQQTR RLQTEIEDLQ RSIQWTERRA
DRYRVEIHKK FSIAVACLIF VLIGMPLGLS VRRGGLGLAG GLALAIFLFY WITLVQGEKL
ADRGYLTPWI GMWLPNLVMG LLGVALFVYV SFDLRVTRPL TWLTCKLKAL RHALSRSYAH
R
|
|---|
| |