Gene Rmar_0207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0207 
Symbol 
ID8566837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp219258 
End bp221072 
Gene Length1815 bp 
Protein Length604 aa 
Translation table11 
GC content64% 
IMG OID 
Productribonuclease, Rne/Rng family 
Protein accessionYP_003289501 
Protein GI268315782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.295095 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCAAAG AGATTATCAT CAACGCCGAG AAGGATCAGA CGCGCATTGC CATCGTCGAG 
GACGGGACCC TGGCCGAGTT CTACATCGAG GATCCCGAGC ACGAACGGAC CATCGGCAAC
ATTTACCTGG CCCGGGTCTG CCGCGTCATG CCCAGCATTC AGGCCGCCTT TGTGGACATC
GGCCAGCAGC AGGACGCCTT CCTGCACTTT TCGGACATTG CGCCGAGCCT GCCCCTGCAG
TTGAAGTTTC TGGCCGATCC GCAGCCGAGC GTTCGCAAGC TGGCGGCCGA GATCGAACAG
CATCACCAGA GTCTGGCCCG ACGCCGACAC CCACGGCCGC ATCGCGCCGA TAAGTCCGAG
GCGTCCGACG AAGACGAAAC GACGGAAGCG GCCGCGTCCT CGCGGCGACG GCGTCTGGAC
GCGCGCCTGC GCGGGCGACG GCGCTCGGCG CAGCGCCGGC TGCAACGCAA GACCGCGGCC
GAAACGACGA CCACCGAGGC CGAGGCGGCA CCGCATGCCG ACGTTTCGCC CGAGACGCTG
CTGAAGCGCG ACCAGCCGCT TCTCGTCAAG ATCATCAAAG AGCCGATTTC GTCCAAAGGG
AGCCGGGTAT CGACCGACAT CTCGCTGGCC GGGCGCTTTC TGGTGCTGGT GCCGTTTGCC
AACTACGTGG CCGTCTCCAA GAAAATCACC TCCTACAAGG AGCGGCGGCG GCTGCGGGCG
CTGGCCCGGA GTCTGCTCCC CGAAGGCTTC GGCGTGATCG TGCGCACGGT GGCCGAAGGC
CAGACCGCCA AGGCGCTCGA CACCGACCTG CGCCTGCTCC TGGAAAAGTG GGAGCGCATC
GAAAAGAAAC TGGCCGAGCA TCCCAAACCG CCCGTCCTGC TCCATGAAGA CGTGAACATG
GTCTCGTCGG TCATCCGAGA TCTGTTCTCG GAGGACTGCA CGCGCATTCT CGTGGACAAT
CCCCGCCTGC ATCGCAACAT CCGGAGCTAC GTGCAGGCGG TGGCCCCGCA CAAGGTGGAG
GTGGTGCAGC TCTACCGGGG CAAAGAACAC ATTTTCAAGG CCACAGGGAT CGCCGAGCAG
GTGGCCCAGG CCTTCGAAAG TCGCGTCGAC CTGCCCTCGG GCGGCTACCT CTACATCGAG
CACACCGAGG CCATGCACGT CATCGACGTG AACTCGGGAC GGGCCGGACG CGGCCTGAGC
CAGGAGGAAA ACTCGCTGCG CGTGAACCTG GAGGCGGCCC GCGTCATCGC CCAGCAGGTG
CGCGTGCGCG ATCTGGGCGG CATCATCGTG ATCGACTTCA TCGATCTGAA GGACGAGAAG
AACAAAAAGA AGGTCTACGA CGAGCTCAAG AAGGAATTCA GGAAGGACCG GGCCGTGACC
AAGATTCTGC CCATGAGCGA CTTCGGCCTG GTCCAGATCA CGCGCCAGCG GCTGCGGCCC
AGCCTGACCA CCACGTTTGA CAAGATGGCC GAGCGGCTTG CCCGCGAAAA AATTCTGCCG
CCGGCTCCGT CTCAGCCCAC CCCGGAGGCA TTGCTGGAAG CCATGGAGCG CTGGCTGCAG
GCTTACCGAC ACGCGGGCGG ACGCCGGAAC GTCACGCTGC GGGTGCATCC GTTCACAGCG
GCCTATCTGA CGCGACGCGT GCCGACCTAC CCGACGCGCT GGTTGCTCAA GCACCTGGTG
CGCGTCCGGC TGGAATCCGA CCCGAACCAG CCGCCGCTGA GCTTCCGCTT CGAGGATCCC
GCGACCGGCG AGGACCTGAC CGAACGATTC ACGATCTTCC AGAACGGACA GCACCCGGAA
AAAATATCTG CCTGA
 
Protein sequence
MAKEIIINAE KDQTRIAIVE DGTLAEFYIE DPEHERTIGN IYLARVCRVM PSIQAAFVDI 
GQQQDAFLHF SDIAPSLPLQ LKFLADPQPS VRKLAAEIEQ HHQSLARRRH PRPHRADKSE
ASDEDETTEA AASSRRRRLD ARLRGRRRSA QRRLQRKTAA ETTTTEAEAA PHADVSPETL
LKRDQPLLVK IIKEPISSKG SRVSTDISLA GRFLVLVPFA NYVAVSKKIT SYKERRRLRA
LARSLLPEGF GVIVRTVAEG QTAKALDTDL RLLLEKWERI EKKLAEHPKP PVLLHEDVNM
VSSVIRDLFS EDCTRILVDN PRLHRNIRSY VQAVAPHKVE VVQLYRGKEH IFKATGIAEQ
VAQAFESRVD LPSGGYLYIE HTEAMHVIDV NSGRAGRGLS QEENSLRVNL EAARVIAQQV
RVRDLGGIIV IDFIDLKDEK NKKKVYDELK KEFRKDRAVT KILPMSDFGL VQITRQRLRP
SLTTTFDKMA ERLAREKILP PAPSQPTPEA LLEAMERWLQ AYRHAGGRRN VTLRVHPFTA
AYLTRRVPTY PTRWLLKHLV RVRLESDPNQ PPLSFRFEDP ATGEDLTERF TIFQNGQHPE
KISA