Gene Rmar_0185 details

Gene Information

• Locus tag: Rmar_0185
• ID: 8566815
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodothermus marinus DSM 4252
• Kingdom: Bacteria
• Replicon accession: NC_013501
• Strand: +
• Start bp: 198978
• End bp: 201053
• Gene Length: 2076 bp
• Protein Length: 691 aa
• Translation table: 11
• GC content: 63%
• Product: PAS/PAC sensor signal transduction histidine kinase
• Protein accession: YP_003289479
• Protein GI: 268315760

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.483444
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAAGGC TGCTCCCTGA CTACATAGCG CATCGCTCGA CGCACAACAG GCAGATCTAC 
AGCGTGCTGC TGGGCGGCGT GTTGTTGAGT GTAGGAGTGG CCGTGTTGTC GTGGTTGCAG 
GGATGGGAAA GCGTCGGCCT GTTGGTGGCG CTGCTGGTGG CGACGGCGGC CTGGGGTACG 
GGGCTGTGGC TTATGGGCCG ACAGCGCGCC GAGGTGCTGG CAACCTATCA GGCCTTTTTT 
GAGCATGCGC TGGAAGGCAT TTTTCAGGCT GACCGAAAGG GCAAGCTGCT GGCGGTCAAT 
CCGGCGCTGG CCCGGATGCT GGGCTACGAA CAGCCGGAGC AACTCCAGGG GCTGCATCTC 
GCTACCGATG TGCTGGCCGA GGCAACCGAG TTTGAGCATC TGCTGCTGCA GCTCGAAGCG 
CACGGTGCCG TGCGTAACCA TTACCTTCAG CTCCGGCGTC GTAACGGAGA AGTCTTCTGG 
GCGCGCATGA ATATCTGGAA GCGAGAGGAA CTGTTTGAGG GGACTGTTGA GGATGTTTCG 
AGTCTGCAGG AAGCCGAGGC TGCGCTTCGG GCCAGCGAAG CGCGTTATCA GGCCTTGCTG 
GAGCACCTGC CGGTGGGAGT CTATCGGAGC ACACCGGACG GCACGATCCG GACCGCTAAC 
CCGGCCGCCG CACGCATGCT GGGTTACGAA TCGGTCGAGG CGTTGCTCCG GGCCAATGCG 
CGTTCATTGT ATGTCGATCC GGCGCAGCGC GAAGCTTTTC TGAAACAACT GCGTGAGAAA 
GGGGAGGCGA CAGCCGAGCT GGCCCTGCGA CGGCCCGACG GCACCATCAT CTGGGTGCAA 
AATTACGCCC GCTGCATCGT CGAACAGGAC GGGCAGGTGT ACTTCGACGG GGTGCTGATT 
GACATTACCG AGCGAAAGCA GGCCAGACAG GCCCTTCAGG AAACAGAAGA GCGCTATCGT 
CAGCTGCTGG AGCAGTTGCC CGAGCCGGTG GTCGTGCACG ATGGTGAGAC CATTCTTTAC 
GCCAACGCGG CGGCCGCCGC TTTTGCCGGA CTGAGCAGCT CCGAGGAACT GATCGGGAAA 
TCGATCTACC AGTTTCTGCG AACGGAAAAG GCCGACGCCA TTCGGCGCTA TCTGGAAATG 
GCCGTGCAGC AGGGCCGTCA ACTTCCGCCC ATGGAGCAGC AGATGGTGCG GGCCGACGGG 
GCCGTGCGGG ATGTCGAAAT CGTCAGCGCA CTGGTGCAGT ATCAGGGACG CCCGGCCTTT 
CAGGTGGTCC TGCGTGACAT CACCGAGCGC AAGCAGTACG AGCGGCACCT GCTGGAGGCC 
AAGGAGCGGG CCGAGGAGAT CGCCCGGCTC AAGTCAACGT TGCTGAGCAA CATCAGCCAT 
GAGATTCGCA CGCCGCTGGC CGGTGTCATC GGGTTTGCCG AGGTGCTCGA AGAGGAACTG 
GATGAGCCGC ATCGCGAACT GGCCGCGCTG ATCCGCGACA GTGGCCGTCG GCTGCTGGAG 
ACGCTCAACA CGCTGCTGGA TCTGGCCCGG ATCGAAGCCG GTGCCTTTGT GCTCACGCCG 
GAGCCGTTCG ATGCGGCCGA CGAAGTGCGC CAGAGCGTCC GCATCTTCCA GCGCATGATC 
GACGACAAGG GGCTCCGGCT GGAGCTGGAC CTGCCGGACG CCCCGCTGCC GGTCTATCTG 
GACCGTAACG GCTTCCACCG GATCGTGGTC AACCTGGTCT CGAATGCCGT CAAATTCACC 
GACGAAGGCA TGATCCGCGT CGGGCTGGCG GCCGAAGGGG ACTGGCTCCG GCTTCAGGTA 
CAGGACACGG GCGTGGGGAT CGATCCGGCG TTTATGCCGC ATCTCTTCGA GGAATTCCGG 
CAGGAAAACA ATGGCCTGGC GCGCACCCAT CCGGGCAGCG GGCTGGGACT GGCCATCACG 
CACCGGCTCG TCGAAATGAT GGGCGGCCGC ATCGAAGTGC AAAGCGAAAA GGGTAAAGGC 
ACCACGTTCA CCGTGTGGCT GCCGCTGCGC CTGACGAACG GAACGAAGAC CGAGACCACT 
TCCACCACGG CAAATTCAAC AAAGTCGAAC GCCTGA 

 

Protein sequence

MQRLLPDYIA HRSTHNRQIY SVLLGGVLLS VGVAVLSWLQ GWESVGLLVA LLVATAAWGT 
GLWLMGRQRA EVLATYQAFF EHALEGIFQA DRKGKLLAVN PALARMLGYE QPEQLQGLHL 
ATDVLAEATE FEHLLLQLEA HGAVRNHYLQ LRRRNGEVFW ARMNIWKREE LFEGTVEDVS 
SLQEAEAALR ASEARYQALL EHLPVGVYRS TPDGTIRTAN PAAARMLGYE SVEALLRANA 
RSLYVDPAQR EAFLKQLREK GEATAELALR RPDGTIIWVQ NYARCIVEQD GQVYFDGVLI 
DITERKQARQ ALQETEERYR QLLEQLPEPV VVHDGETILY ANAAAAAFAG LSSSEELIGK 
SIYQFLRTEK ADAIRRYLEM AVQQGRQLPP MEQQMVRADG AVRDVEIVSA LVQYQGRPAF 
QVVLRDITER KQYERHLLEA KERAEEIARL KSTLLSNISH EIRTPLAGVI GFAEVLEEEL 
DEPHRELAAL IRDSGRRLLE TLNTLLDLAR IEAGAFVLTP EPFDAADEVR QSVRIFQRMI 
DDKGLRLELD LPDAPLPVYL DRNGFHRIVV NLVSNAVKFT DEGMIRVGLA AEGDWLRLQV 
QDTGVGIDPA FMPHLFEEFR QENNGLARTH PGSGLGLAIT HRLVEMMGGR IEVQSEKGKG 
TTFTVWLPLR LTNGTKTETT STTANSTKSN A