Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0183 |
Symbol | |
ID | 8566813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 196829 |
End bp | 197701 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | |
Product | Proline dehydrogenase |
Protein accession | YP_003289477 |
Protein GI | 268315758 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGTAA AACTCCCGTT TGTGCTGGCG CGCCGCTTCG TGGCGGCCGA ATCGCTGGAA GGCACGCTGC CGGTCCTCCG GCAACTCTGC GCCGAAGGGC TCTACGTCAC GGTTGACCGC CTGGGCGAGT ACGTACACGA TCGCCAGCAG GCCCTCGCCA CCCGTGACGC CTATCTGGGG CTGATCGACG TGCTGGCCAA CGAGCGCGAT GCCGGACGCC TGCGCGATGC CAACGTTTCA CTCAAGCTTT CCTCGCTGGG CCAGAAAATC GACGAAGCGT TCTGCCTGGA CAACCTGCAC CAGCTCCTCG AAGCGGCCCG GCCTCGCGAC GTGTTCATCC GGCTCGACAT GGAAGGCAGC GACCTGACCG AGTCCACGCT CCGGATTTTC GAGCAGGTCT ACCCGGACTA CCCCGACCAT GTGGGCCCGG TGCTCCAGGC CTATCTGAAG CGCACCGCCC GCGACATTGC CCGCATGTGT GAACTGAAGG CGCGCGTGCG CCTCTGCAAA GGTGCCTACA AGGAACCGCC CGAGATCGCC TACCAGGACA TGCCGACCAT CCGTGCTCGT TTCATCGAGT ACATGCAGCG CCTGCTGCTT GAAGGGCGCT ATCCGGGCAT TGCCACGCAC GACGACGTGC TGATCGAGGC CACCAAGCGC TTTGCCGCCG AGCACCAGAT CGGGAGCGAT CGATTCGAGT TTCAGATGCT CTACGGTATC CGGCCCGAAA CGCAGCGTGA GCTGGTCCGC CAGGGCTACC GGATGCGCGT GTACGTGCCC TACGGGACCG AGTGGCTGCC CTACTTCTAC CGGCGACTGC GCGAGCGCAA GGAGAACGTC TGGTTCGTGG TGAAGAACCT GTTCCGCCGC TGA
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Protein sequence | MPVKLPFVLA RRFVAAESLE GTLPVLRQLC AEGLYVTVDR LGEYVHDRQQ ALATRDAYLG LIDVLANERD AGRLRDANVS LKLSSLGQKI DEAFCLDNLH QLLEAARPRD VFIRLDMEGS DLTESTLRIF EQVYPDYPDH VGPVLQAYLK RTARDIARMC ELKARVRLCK GAYKEPPEIA YQDMPTIRAR FIEYMQRLLL EGRYPGIATH DDVLIEATKR FAAEHQIGSD RFEFQMLYGI RPETQRELVR QGYRMRVYVP YGTEWLPYFY RRLRERKENV WFVVKNLFRR
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