| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0148 |
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| Symbol | |
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| ID | 8566773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodothermus marinus DSM 4252 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013501 |
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| Strand | - |
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| Start bp | 163158 |
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| End bp | 164051 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | shikimate 5-dehydrogenase |
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| Protein accession | YP_003289444 |
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| Protein GI | 268315725 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACCGG GCACCGACGT TTCGATCCGG GCAACCACGC GTCCGATCGC GCTGCTGGGC
GATCCGGTGG CGCATTCCTT CTCGCCGCTC ATCCACAACA CGGGATTTCA GACGCAGGGG
CTGGACTTCG TCTATCTGGC CTGCCGCGTT CCGAAAGACG CCCTGCCCGA GGCGATCGCG
GGCCTGCGGG CGCTCGGCTT CGCCGGGGCC AACGTGACAA TCCCGCACAA AGAGGCCGTG
CGGCCGCTGC TGGACCGGTG CACGCCCCGG GCCGAGGCCA TCGGCGCCGT CAACACGATC
GTCTGCCGCG CGGACGGCTC GGGTGCCGTG GAACTCATCG GCGACAATAC GGACGTGGAA
GGCTTTCTGG AGCCGCTGCA GTCACTGGCC GATCGCCTGG CGGGCGCGGA GATGGTGGTG
CTGGGCGCCG GTGGCGCAGC GCGGGCCGTG GTGTATGCAC TGCTCACGGA ATTCCGACCG
ACGCGGCTGA CGATCGTTGC GCGCACGCCC GCACGCGGCG AAGCGCTGGC CGCCGACTTT
GCCACGTACG ACACGCGTCG GGCGTTGCAG GTGATGGCAC CGGACGAGGC GGCACCGGCC
GTCCGAAGCG CCTGCCTGAT CGTCAACGCC ACGCCGGTGG GGATGCATCC GCACGTCGCG
GCCTCGCCCT GGCCCCACGC CGAAGACTTC GGCCCCGAGC AGATCGTCTA CGACCTCGTG
TACAATCCCG TGCGGACCCG CCTGCTGCGC GAGGCGGCCG CGCGGGGTGC CACCACGATC
GACGGGTTGA CCATGCTCAT CGGACAGGCG GCCGCCGCCT ACCGTCAGTG GACCGGCCGT
GAGCTTCCAC GCGAGGCGGT GCAGGCCGCC CTGAAGCCGC TGTTTCAGGA CTGA
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| Protein sequence | MTPGTDVSIR ATTRPIALLG DPVAHSFSPL IHNTGFQTQG LDFVYLACRV PKDALPEAIA
GLRALGFAGA NVTIPHKEAV RPLLDRCTPR AEAIGAVNTI VCRADGSGAV ELIGDNTDVE
GFLEPLQSLA DRLAGAEMVV LGAGGAARAV VYALLTEFRP TRLTIVARTP ARGEALAADF
ATYDTRRALQ VMAPDEAAPA VRSACLIVNA TPVGMHPHVA ASPWPHAEDF GPEQIVYDLV
YNPVRTRLLR EAAARGATTI DGLTMLIGQA AAAYRQWTGR ELPREAVQAA LKPLFQD
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