Gene Rmar_0138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0138 
Symbol 
ID8566763 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp148738 
End bp150162 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content64% 
IMG OID 
Productpotassium uptake protein, TrkH family 
Protein accessionYP_003289434 
Protein GI268315715 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGGTC TGAAGTGGTC GGCCCGGCGC TCGTCTGCAC TTCTGGTGAA GCAACCTCGC 
CGTGAAAGCT TCTGGCGTCG CCTTTCACCC CCGCAACTGT TCGTCGGATC GTTTCTGCTG
CTCATTCTGC TGGGCACGCT GGGCCTCAAA ACGCTGCCCG GTCTTTACAC CGGCGCGCCG
CTTTCTTGGC TGGACGCTCT GTTTACGGCC ACCAGCGCCG TCTGCGTGAC GGGGTTGATC
GTGGTCGATA CGGCCACGTA CTTCACAGTC TGGGGCCAGG CCTTCATCCT GCTGCTCATT
CAGCTCGGCG GGCTGGGCAT CATCACGTTC ACCACCGTGC TCATCGTTGC GCTGGGGCGG
CGGCTGTCGC TGCGGCAACA GGCGCTGGCC GCCAGTGCCG TCGAGGCCGC GCCGCACGTC
GATTACCGGC AACTGGCCCG CGACGTGGTG CGCTTCACGT TCCTGATCGA AGCAGCGGGG
GCATTGCTGC TCTACCTGGG TTTTCTGCCC GAACTGGGGT GGCGCGGCGC TTTCTGGCCG
GCGGTTTTTC ATGCGATCAG TGCTTTCTGC AACGCGGGCT TTTCGACGTT TTCCGATTCG
CTCGTCGGTT TTCGCACAAA TCCTGTTGTG CTGCCGGTGA TCATGGTGCT GATCGTGGTT
GGCGGGCTGG GCTTTCTGAC GCTTGAGGAG CTGTACCTGT GGCGGCGGTC GATCCGGGAG
CGGCGGCGCT TCCGGCTGTC GCTGCACTCG CGCCTTGTAC TGACCACAAC GGTCCTGCTG
CTCGGCGTGG GGTGGGTCTT TTTCGTGTTC TTCGAGTGGA AGGCCACGCT GGCCGCGTTG
CCCCTGCCGG CCAAGTTGCT CAACGGCCTG TTCATGAGCG TGACGGCACG TACGGCCGGC
TTCAACACGA TCGACTACGG CGCGGCCACC GAGCAGACGA ACTTTCTGAC CATTCTGCTG
ATGTTCGTGG GGGGCTCGCC GGGCTCGATG GCCGGTGGCA TCAAGACGAC AACGATCGCG
CTGCTCGTGT TGCTGGCCAT CTCCAGGCTC CGGGGACAGG AGGTCCCGAG CTGCTGGAGC
CGTTCGGTGC CCCACGAGGT CGTGCAGCGG GCGGTCGGGC TGTTCGTGGT GGCCGTGGCC
GTGCTAATGC TGGGAAGCTT TGTGCTGACG GCCACCGAGA TCGAGCACGG CGTGACGGCG
CCGGGAAGCT TTCTGAAATA CCTGTTCGAA GCTTACAGCG CCTTCGGGAC GGTCGGCCTG
TCCATGGGCG TAACGCCGTC GCTTTCGACA ACCGGGCGCT GGATCATCAT CCTGCTGATG
TTCATCGGGC GGGTGGGACC GCTGACGTTC GCCGCGGCGT TGACGATCCG GCGGCACCGC
ACGCGCCAGT TTCGGTACGC TTACGAAGAC GTGGTGGTCG GATGA
 
Protein sequence
MLGLKWSARR SSALLVKQPR RESFWRRLSP PQLFVGSFLL LILLGTLGLK TLPGLYTGAP 
LSWLDALFTA TSAVCVTGLI VVDTATYFTV WGQAFILLLI QLGGLGIITF TTVLIVALGR
RLSLRQQALA ASAVEAAPHV DYRQLARDVV RFTFLIEAAG ALLLYLGFLP ELGWRGAFWP
AVFHAISAFC NAGFSTFSDS LVGFRTNPVV LPVIMVLIVV GGLGFLTLEE LYLWRRSIRE
RRRFRLSLHS RLVLTTTVLL LGVGWVFFVF FEWKATLAAL PLPAKLLNGL FMSVTARTAG
FNTIDYGAAT EQTNFLTILL MFVGGSPGSM AGGIKTTTIA LLVLLAISRL RGQEVPSCWS
RSVPHEVVQR AVGLFVVAVA VLMLGSFVLT ATEIEHGVTA PGSFLKYLFE AYSAFGTVGL
SMGVTPSLST TGRWIIILLM FIGRVGPLTF AAALTIRRHR TRQFRYAYED VVVG