Gene Rmar_0084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0084 
Symbol 
ID8566709 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp92982 
End bp95411 
Gene Length2430 bp 
Protein Length809 aa 
Translation table11 
GC content70% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003289381 
Protein GI268315662 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGGCA TGGGGCTGGC GCTGGCGGCC GGGCCCTACT GGCTGCGCCG GGCGCTGGCG 
CAGCCGTCGG CTTCGAGTTC GCCCTTCGTC GAAGCCCGCA TCCCCGAGCG GGGCATGTAC
AGCCTGCAAC CGGCCGCCCG CTGGGAAGAA GCGCTCGTGG CCGGCAACGG CACGCTGGGC
ATCCTGGTCT ACGGCGATCC GCTGAACGAG CGGATCATCT TCAACCACGA ACTGCTCTAC
GAACCGCTGC GCGACGAGCG CGTCCCCCCG CCCAATCTGG CGCCCTACCT GCCCCGCATT
CGCGCCCTCA TGCTCGAAGG CCGTTACCGC GAGGCCGTGG CCTACTCGCT CGAAATGGCC
CAGCGCGAGG GCTGGCCGGG ATTGCTCTGG ACCGATCCCT ACCATCCGGC CTTCGCCCTC
GTGCTGGAAA TGCCGACGGA GACGCCCACC GAGTACCTGC GCCGCACGGC CTTCGACACC
GGCGAGATCG GCGTCTTCTG GCGCACGGCG ACCGACACCT ACACGCGGCG GGCCTTCGTC
TCGCGCACCG ACGGCGTCGT CGTGCTGGAG CTATCGGCCG AGGCCGGACC GCTTCCGGAC
CTGACCCTGC ACCTGGAGGT GCAGGACGTG CGTCCGCCCG AACAGCGCGA GGGCTATCAC
CCGCCCGAGA TCACGGCTGC GCCTGGCTGG CTGAGCTACC GCTGCGCCTA CGTGCACACA
CGCCGCGGCT ACGAGGGGCT CGTGCGCGTG GAGGCCGAAG GGGGCACGCA GACCGTTCGC
GACGGCCGCC TGCACGTCCG AGGTGCCCGG CGCGTGCTGC TGCTGGCCCG CGTGTGGACG
CTCGACGACG TGGCCGCCTC GCGCCTGGCG GAAGAACAGG CGGCGCTGGC CGCCTTTCCG
GCCGACTACG ACCTGCTGTT TGCGCCCCAC GCCGCGGCGC ACGGCGCGCT GTTTCGCCGC
ATGAAGCTGG ACCTCGAAGC CGGCGACGAC CGCCGGAAAA GCAGCGAAAC GCTCCTGGCC
GAACAGCAGA CCCACGAGAC CATCCTGCCG GCGCTGCTCG AAAAACTCTT CGACATGGGC
CGCTACGTAC TGATCAGCTC CTGCGGCCAC TGGCCGCCCA ACCTGGTGGC GCTCTGGACG
GGCGAATGGC GGCCGCCCTG GTCCGGCGAC TTCACGCTCG ACGCCAACCT GAACCTGCAG
ATGGCGGCCG CCAGCATCGG CGCCGTGCCC GAGGCCGTCG CCAGCCTGAC CCGCCTCCTC
GAAGGATTGC TCGATGACTG GCGCGATAAC GCCCGCCGCC TCTACGGCTG CGAGGGCGTA
CTCTCGGGCT CCCGCACCGA CGGCCGTTGT GGCTGGCACA CCCATTTCAA CGCCGACTAC
CCGCTGCATT TCTGGACGGC CGGCGCCGGC TGGCTCGCCC AGCCCCTGCA CGAGTACGCG
GAGGTCTACG GCGACGAAGC CTTCGTCCGT GAGCACCTGA TCCCCTATCT CAGAGAAGTC
GCCCGCTTCT ACGAGACCTT CCTGACCGTC ACCGACGCCG AGGGGCACGT CGTCTTCGTC
CCTTCCTACT CGCCCGAAAA CCGTCCGGGC AACCTCGACA CGCCGGGGAG CATCAACGCG
ACCATGGACA TCGCCGTCTG TCGCGAAGTG CTCTCGACGC TGATCGCGCT GTGCGAGGCG
CGAGGGCTCG AAGCCGACAG CCTGCCGCGC TGGAAGGCGC TGCTGGACCG ACTGCCGCCC
TACCTGATCA ACGAAGACGG CGCACTCAAA GAGTGGGCGC ATCCCGACCT GGCCGACAAT
TACGACCACC GGCACCTGTC GCACCTGTAC CCGGTCTGGC CTGGCCACGA GATCACGCCC
GAGGCGACGC CCGAACTATT CGAAGCGGCC CGCAGGGCGG CCTACCTGCG CGGGCACGAG
AACGACTCGG CCCACGGGCT GGTGCATCTG GCCCTGATCG GGGCCCGTCT CAAAGACCCC
GAACTGGCCT ACCGGAGCCT GCGCGACCTG ATTCGCAACG GCTACCTGCT GCCCAGTCTG
TTTTCGCTGC ACTATCCGGG CAACGTTTAC AACGCGGACC TGATCAACAG CCTGCCCGCC
ATCGTCATCG AAATGCTGCT CTACAGCCGC CCGGGCCTGC TGGAGCTGCT GCCCGCCGTG
GACGAGCGGC TGCCACGCGG CACGCTGCAC GGCGCCCGGG CACGCGGACG GCTGCGGGTG
GAGCGGCTAC GCTGGGATCT GCCCGCCCGG CACGTCGAAC TGGCGCTCGT GTCCGACACC
GACCGGACGC TCACGCTGCG CGTGCGTCGG GGCATCGCCG AGCTGCAGGC GATCGAAGGA
CCGACGCCGG AGCGGACGTC CGCGACCGAC GCCACGCTGC AACTCGCCGC CCGAACGCCC
GCCACGCTGC AGATCCGTCT GGCCGGCTGA
 
Protein sequence
MKGMGLALAA GPYWLRRALA QPSASSSPFV EARIPERGMY SLQPAARWEE ALVAGNGTLG 
ILVYGDPLNE RIIFNHELLY EPLRDERVPP PNLAPYLPRI RALMLEGRYR EAVAYSLEMA
QREGWPGLLW TDPYHPAFAL VLEMPTETPT EYLRRTAFDT GEIGVFWRTA TDTYTRRAFV
SRTDGVVVLE LSAEAGPLPD LTLHLEVQDV RPPEQREGYH PPEITAAPGW LSYRCAYVHT
RRGYEGLVRV EAEGGTQTVR DGRLHVRGAR RVLLLARVWT LDDVAASRLA EEQAALAAFP
ADYDLLFAPH AAAHGALFRR MKLDLEAGDD RRKSSETLLA EQQTHETILP ALLEKLFDMG
RYVLISSCGH WPPNLVALWT GEWRPPWSGD FTLDANLNLQ MAAASIGAVP EAVASLTRLL
EGLLDDWRDN ARRLYGCEGV LSGSRTDGRC GWHTHFNADY PLHFWTAGAG WLAQPLHEYA
EVYGDEAFVR EHLIPYLREV ARFYETFLTV TDAEGHVVFV PSYSPENRPG NLDTPGSINA
TMDIAVCREV LSTLIALCEA RGLEADSLPR WKALLDRLPP YLINEDGALK EWAHPDLADN
YDHRHLSHLY PVWPGHEITP EATPELFEAA RRAAYLRGHE NDSAHGLVHL ALIGARLKDP
ELAYRSLRDL IRNGYLLPSL FSLHYPGNVY NADLINSLPA IVIEMLLYSR PGLLELLPAV
DERLPRGTLH GARARGRLRV ERLRWDLPAR HVELALVSDT DRTLTLRVRR GIAELQAIEG
PTPERTSATD ATLQLAARTP ATLQIRLAG