Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0075 |
Symbol | |
ID | 8566700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | - |
Start bp | 80168 |
End bp | 81508 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | pyrimidine-nucleoside phosphorylase |
Protein accession | YP_003289372 |
Protein GI | 268315653 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCCGACG TTGTCGAACT GATCATCACG AAGCGCGACG GAGGTCACCT GGCCCCGGAC GACCTGCGCT GGCTCGTGCA GGCCTACACG CGCGGCGAAG TGCCCGACTA TCAGATGAGC GCGTTCCTGA TGGCCGCCTT CATCCGCGGC CTGAACGAGG CGGAAATGGA CGCGCTCACC GATGCTATGC TGCACTCGGG GCACGTGCTG GATCTGTCGG ACCTGCCCGG CCGCAAGGTG GACAAGCACT CCACCGGCGG CGTAGGCGAC AAGGTCTCGC TGATCCTGGC GCCGCTGGTG GCCGCCTGCG GCGTGCCGGT GCCGATGATC TCGGGTCGGG GTCTGGGCCA CACGGGCGGC ACGCTCGACA AACTGGAATC GATCCCGGGC CTGCGCACCG ATCTGTCGAT CGAAGCCTTT CGCCGCCAGC TCCGGGAACT GGGCGTGGTG ATGATCGGCC AGACCGACGA GATCGCGCCG GCCGACCGCA AGCTCTACGC ATTGCGCGAC GTGACGGGCA CGATCGAGTC GATTCCGCTT ATCGCCGCCT CGATCCTGAG CAAGAAACTG GCCGAAGGGG CCGACGCGCT CGTGTTCGAC GTCAAGTGCG GCCGTGGGGC CTTCATGCAG CAGGAGGCGG ACGCCCGGCG CCTGGCCGAA ACGCTCGTGG GCATCGCCAC GCGGGCCGGA CGGCCGGCCG TGGCCTGGCT GACCGACATG AACGTGCCGC TGGGCCGTGC CGTGGGCAAC TGGCCCGAGG TCGTCGAAAG CCTGCGGGCG CTTCGCGGCG ATTTTGAAGG GATCGAAGAC CTGATCGAAG TCACGCTGGC GCTGGCCGGC GAAATGCTCT GGCTGGGCGG CGCCGCCGAA ACGCCGGAGG CCGGACGCAG ACTGGCCCGG GTGGCGCTGA CGGATGGACG CGCCTTCGAG CGCTTCTGCG CCATGGTGCG AGCTCAGGGC GGCGACGTGC GCGTGCTCGA GCGCCCCGAG ACCCGTCCCG ACACCGAACC GGCCGGCGAG GTGCGCGCCC CCGACGGGGC CCGCGGCTAC GTGGCCGATC TGGACGCCCG CGCCGTGGGA CGGCTGGCCG TGCATCTGGG CGCCGGCCGC CGCGTCAAGG AAGATCCGGT GGATCCAACG GCCGGCCTGG TGCTGCACCG GAAGCCCGGC GATCCCGTGG CGCCCGGCGA CGTGCTCGCC ACGCTCTACA CGCGCCGCCG CGACCGGCTC GTCGATTTCC GACAGGCGCT GCTGGCCGCC TACCGCTTCG CCGAGACCCC ACCGCCCCCA CGCCCGCTGC TACTCGCCCG CTACGCCGAG GGGCGGTGGA CCCTCCCCTG A
|
Protein sequence | MPDVVELIIT KRDGGHLAPD DLRWLVQAYT RGEVPDYQMS AFLMAAFIRG LNEAEMDALT DAMLHSGHVL DLSDLPGRKV DKHSTGGVGD KVSLILAPLV AACGVPVPMI SGRGLGHTGG TLDKLESIPG LRTDLSIEAF RRQLRELGVV MIGQTDEIAP ADRKLYALRD VTGTIESIPL IAASILSKKL AEGADALVFD VKCGRGAFMQ QEADARRLAE TLVGIATRAG RPAVAWLTDM NVPLGRAVGN WPEVVESLRA LRGDFEGIED LIEVTLALAG EMLWLGGAAE TPEAGRRLAR VALTDGRAFE RFCAMVRAQG GDVRVLERPE TRPDTEPAGE VRAPDGARGY VADLDARAVG RLAVHLGAGR RVKEDPVDPT AGLVLHRKPG DPVAPGDVLA TLYTRRRDRL VDFRQALLAA YRFAETPPPP RPLLLARYAE GRWTLP
|
| |