| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0070 |
|---|
| Symbol | |
|---|
| ID | 8566695 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | - |
|---|
| Start bp | 72626 |
|---|
| End bp | 73816 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | alanine racemase domain protein |
|---|
| Protein accession | YP_003289367 |
|---|
| Protein GI | 268315648 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGACGA TTGAAGCCCT GCCCACGCCG GCCGCGCTGA TCGACCGACA GCGCCTGCTG
GGCAACCTCC GGGAAATGCA ACAACGCGCC ACGCAGGAAG GCGTCGCGTT GCGTCCGCAC
GCCAAAACGC ACAAGACGCC AGAGCTGGCC CGCCTGCAGC AGGAGCTGGG CGCCACGGGC
ATTACGGTGG CCACGGTCGA TGAGGCGGAG GCGTTCGTGG CGGCCGGCCT TACGGACGTG
CGCGTGGCCT ATCCCACCGT GGGCATCGAT CGCTACGAGC GGCTGCTGGC GCTCATGGCC
CAGGCGCGGA TCTCCTTCTG CCTCGACACG CCCGAAGCGA TCCGTGCGGC TTCGGACTTT
TTCGCCGCGC GCGGCCGCCA GGCCGAGGTG CTGCTGGAGG TCGATACCGG CTTCGGCCGC
ACGGGCGTGC GCTGGGACGA TGCCCGGCGG CTGGTGGACT GCGCCCGATT GATTCAGGAA
AGCCCGGGGC TGCGGCTGAT CGGCCTGCTC ACCCATGCGG GTCAGGCCTA TCACGGCCCC
GGGCCTGATG AATCGCCGGC CGATGCCCTC CGACGCGTGG CCGCCGAGGA GCGCGATCGT
CTGCTGGCGG CGGCCGTCAC GCTGCAGCAG GCCGGGCTGG CCCACCCCGA GCGCTTCGAA
CTCAGCGTCG GCTCCACCCC CACGGCGCAT TACTTCACGA ACCGAACGGA ACAGGGCTTT
CGCATTACCG AAATCCGTCC CGGCAACTAC GTTTTCCACG ACGTGATGCA GGTGGCGCTG
GGGAGCTGCA CACGCGACGC CTGCGCGCTG ACCGTGCTGG CCCGGGTGGT CAGCCGCAAA
CCGGACGGTC GGGGCGGCTG GTGGGTCTTT CTGGACGCCG GCAAAAAAGC ACTGGCAACG
GATCAGGGCT ACGGAACGCG GGGCTACGGC CTGCCGCTCT ACCACCCGGC CAGCCGCACG
CCGCTACCCC ATGCGGTCAT CGAACGCCTT TCGGAAGAGC ATGGCTGGAT GCACGTACGC
GGTGGCACGA CGCTCCAGAT CGGCGACCGC GTGCAGATCG TACCCAACCA TGCCTGTCTG
ATCGCTCCGC TCCTGCGCCG CTTCTACGTG CTCGAGGGCG ACGAAGTGGT GGCCGAGTGG
TCGGTCGTGG ACGCTGCCAG CTCGGTGCGA AGCGCGTCGA GCACCTGCTG A
|
|---|
| Protein sequence | MQTIEALPTP AALIDRQRLL GNLREMQQRA TQEGVALRPH AKTHKTPELA RLQQELGATG
ITVATVDEAE AFVAAGLTDV RVAYPTVGID RYERLLALMA QARISFCLDT PEAIRAASDF
FAARGRQAEV LLEVDTGFGR TGVRWDDARR LVDCARLIQE SPGLRLIGLL THAGQAYHGP
GPDESPADAL RRVAAEERDR LLAAAVTLQQ AGLAHPERFE LSVGSTPTAH YFTNRTEQGF
RITEIRPGNY VFHDVMQVAL GSCTRDACAL TVLARVVSRK PDGRGGWWVF LDAGKKALAT
DQGYGTRGYG LPLYHPASRT PLPHAVIERL SEEHGWMHVR GGTTLQIGDR VQIVPNHACL
IAPLLRRFYV LEGDEVVAEW SVVDAASSVR SASSTC
|
|---|
| |