Gene Rmar_0069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0069 
Symbol 
ID8566694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand+ 
Start bp72006 
End bp72713 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content67% 
IMG OID 
Productpseudouridine synthase 
Protein accessionYP_003289366 
Protein GI268315647 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.555782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCC CGATTCTCTA CGAAGACGAC GACCTGCTGG CCGTGCACAA GCCCGAGGGG 
CTGGCGGCCA TCCCCGAGCG CGATCCGTCG CGGCCCTCGG CGCGGCGGTT GCTCGAAGCG 
GCACGCGGCG AGCGCCTCTG GGTGGTCCAC CGGCTGGACA AAGAAGCCTC GGGCGTGCTG 
CTGTTCGCCC GCAACGCCGA AGCACATCGC TACATGAACA CGCTCTTCGA GCAACGACAG 
GTGCGCAAGG TGTACCGGGC CCTGGTGCAC GGCCGGCTTG AGCCCGGACA GGGACAGATC 
CGGGCGCCGA TCCGCATGTA CGGCTCCGGA CGCATGGGCG TCGATCCGGA GCGCGGTAAG 
CCCAGCGAGA CGCGTTACCG GGTGCTGGAG TACCTGGACG AAGCCTATTC GCTGATCGAG 
GCGTTGCCGC TGACTGGCCG CCGCCACCAG ATCCGCGTGC ACTGCTACCA CATCGGACAT 
CCCATCGTGG GCGATCCCCG CTACGGCGAC CGCTCGGTGC AGCAGCGCTA TCCGCGCCTG 
ATGCTCCATG CCCTCAGCAT TCGCTTCCGA CATCCGAACG GGCAGGAGCT GGAAATCGTG 
GCACCGGTGC CCGAAAGCTT TCAGCAGGTG CTCGACGCGC TTCGCACCGA GCTGGCAGCG 
TCCACGACCG ACCACTCGGC CACCACTTCG TCGCCCTCGA GCACGTAG
 
Protein sequence
MELPILYEDD DLLAVHKPEG LAAIPERDPS RPSARRLLEA ARGERLWVVH RLDKEASGVL 
LFARNAEAHR YMNTLFEQRQ VRKVYRALVH GRLEPGQGQI RAPIRMYGSG RMGVDPERGK 
PSETRYRVLE YLDEAYSLIE ALPLTGRRHQ IRVHCYHIGH PIVGDPRYGD RSVQQRYPRL 
MLHALSIRFR HPNGQELEIV APVPESFQQV LDALRTELAA STTDHSATTS SPSST