Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rmar_0066 |
Symbol | |
ID | 8566691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodothermus marinus DSM 4252 |
Kingdom | Bacteria |
Replicon accession | NC_013501 |
Strand | + |
Start bp | 68540 |
End bp | 69850 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | outer membrane efflux protein |
Protein accession | YP_003289363 |
Protein GI | 268315644 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTACGC TGGTCGGTTC TGCACTGGCC CAGCAGGTGC AGCGCATCAC GTTCGAGGAG GCGCTTCGGC TGGCTCTGCG GCGCAATCCG GCCATTCAGC AGGCCGCCAA CGAACGCGAA CGCAGCGAAG TCGGTCTGGC CAGTGCGCGC AGCAATTTTC TCCCGGACCT CAGCCTTTCG ATCAGTGGCA GCCGCGACTA CGGCCGCAAC TTTGTCATGG ACGAAGGCCG CGTCGTGGAT CAGACCACCC ATTACTTCAG CTCCGGCATT TCGGCCAACC TGAACCTGTT CAACGGCTTT CGGGACCTGA ACTCGGTCTC GCAGGCACGT TTTCAGGTGG CCGCCAGCGA GCTGAACTAT GCCCGCCAGC GCGAGACAGT GCTGTTCAAC GTGATCTCGA CGTTTCTGTC GCTCATCGAA GCGCGTGAGC AGGTGCGCAT CCAGGAAGAG AATCTGGCCG CGCAGCGGGC ATTGCTCGAA CAGATCGAGG CGTTCGTGCA GGTAGGCAGC CGTCCGGTGG CCGATCTCTA CCAGCAACAG GCCCAGGTGG CCTCGGCCGA GTTGGAGCTG ATCAACGCCC GGCGCAACCA GCAACTGCAG GAGGCGAATC TGATTCAGCT CCTGCAGCTC GACCCGTTCG GCGCCTACGA GTTCGTCATC CCGGAAGTGG ACACGATGGC GCTGGGCGTG CGGGAATACG AGGCGCAGGT CCTGCTGCAG GCCGCACTGG AACGGCGCTC GGACCTTCGG GCGCTGGAGC AGCAGATCGA GGCCGCCGAG TACGGCGTTC GCGTCGCCCG CTCCAGCTAC TGGCCCACCA TTTCGTTGCG GGCCAGCTAT GGCTCCAGCT ACACCGATCT GGCCCCGCTG AGCTTCCAGG ACCAGTTCTT TGATCGCAAC CGGCGTGGCT CGATCGGGCT GAGTCTCTCG TTCCCGATCT TCGATCGGTT CACGACGCGC CACAACGTGC AGCGGGCACG CATCGAGCTG GACAACACCC GCCTGCAGCT TCAGCAGCTT CGCCAGGAGA TCGCCACGCA GGTGCGCCAG GCGTATCTGG ACTACGAGAC GGCCCGCCAG CAGTACCGGG CGGCCCAGGC ACAGCTGCAG GCCGCCCGCC AGGCGCTGGA GGCTGCCCAG GAGCGGTACA ACGTGGGCTC GGCCACGCTC GTCGAACTCA CGCAGGCACG CGCCACCTAC GTGCGGGCCG AGTCGGACCT GGTGCGGGCC CGCTACACGC TGGTGTTCCG TCAGAAACTC ATCGACTACT ACGTGGGCAC GCTGGTGCCC GAACTGGACG TGTTACGGTA A
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Protein sequence | MLTLVGSALA QQVQRITFEE ALRLALRRNP AIQQAANERE RSEVGLASAR SNFLPDLSLS ISGSRDYGRN FVMDEGRVVD QTTHYFSSGI SANLNLFNGF RDLNSVSQAR FQVAASELNY ARQRETVLFN VISTFLSLIE AREQVRIQEE NLAAQRALLE QIEAFVQVGS RPVADLYQQQ AQVASAELEL INARRNQQLQ EANLIQLLQL DPFGAYEFVI PEVDTMALGV REYEAQVLLQ AALERRSDLR ALEQQIEAAE YGVRVARSSY WPTISLRASY GSSYTDLAPL SFQDQFFDRN RRGSIGLSLS FPIFDRFTTR HNVQRARIEL DNTRLQLQQL RQEIATQVRQ AYLDYETARQ QYRAAQAQLQ AARQALEAAQ ERYNVGSATL VELTQARATY VRAESDLVRA RYTLVFRQKL IDYYVGTLVP ELDVLR
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