Gene Rmar_0049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0049 
Symbol 
ID8566673 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp49636 
End bp50586 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content73% 
IMG OID 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_003289346 
Protein GI268315627 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.895383 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGGAC GTCCGACCTC CAGACTGCCC CGGGAACTGG AAGAAGCGTT GCAGGAACGA 
AGCCCGGAGG AGCGCCGCCA GATGGCGGCG CTCTGGGAGC GCCTGGGTGC GCTGGAGCCG
CCCGTCGGGG ACGTGCCTTC CACCGAGGCG GCCTGGGCGG AGCTGTCGGC CCGGCTGGCT
TCGACGCCCC GACCTGCGCG GCCGCCCCGC CGCGCGCTGC GCCGTCGCTG GCCGGTGGCG
GTGGGCCTGC TGCTGGTGCT GGGCCTGATC GGGGCGTACG TGCTGCTCCG CCCGCGTGCG
GTGATCGTGC CGCCGGGCAC GATTCAGACC GTCACGCTGG CCGATGGCTC GACCATCACG
CTGCGGGCGG GCTCCCGGCT GCGGTACGCG GCGACACTGC CCTGGCGACG GCCCCGGCGG
GTGCACCTGA CGGGCGAGGC GCTGTTCGAG GTGGTGCCCG GGCGCCCGCT GACCGTCGAG
ACCGCCCAGG CCCGTGTGGA GGTGCTGGGC ACGCGCTTCA CCGTGCGCGC CTGGCCCGAA
GCGAGCGAAA CCCGCGTTAC ACTGCTGGAG GGGCGCGTGC GGGTACGATC CGTCCGGACG
CCCCGGCAAC CGCTGGTGCT GGAAGCGCCG GGCCAGAGCG TGCGCGTCGG CGCGAAGGCC
GAGCTTTTGC CGGAGCGGAT GACGCCCGAT CAGGTGCTGG CCTGGCGACG TGGCGGGTTC
GTCGTGATCG ACGAGCCGGT GGGTGTCGTG CTGCGTGAGC TGGAACGCAC CTTCGCGCTC
CGCATCGAAG TAGCGGGACC GCTGCCGCTC GACCGGCGCG TGACCGTGCT GTATCAGCAA
CAGGCCCGCC CCGAAGCCAT CCTGCAGGAT CTCTGTCTGA CGCTGCCATG TCACTACCGC
CGCACCAGCC GCGGGTTTGT CGTCGAGGCC GAGCCATCGT CCGGGCGCTG A
 
Protein sequence
MNGRPTSRLP RELEEALQER SPEERRQMAA LWERLGALEP PVGDVPSTEA AWAELSARLA 
STPRPARPPR RALRRRWPVA VGLLLVLGLI GAYVLLRPRA VIVPPGTIQT VTLADGSTIT
LRAGSRLRYA ATLPWRRPRR VHLTGEALFE VVPGRPLTVE TAQARVEVLG TRFTVRAWPE
ASETRVTLLE GRVRVRSVRT PRQPLVLEAP GQSVRVGAKA ELLPERMTPD QVLAWRRGGF
VVIDEPVGVV LRELERTFAL RIEVAGPLPL DRRVTVLYQQ QARPEAILQD LCLTLPCHYR
RTSRGFVVEA EPSSGR