Gene Rmar_0046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRmar_0046 
Symbol 
ID8566670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodothermus marinus DSM 4252 
KingdomBacteria 
Replicon accessionNC_013501 
Strand
Start bp45161 
End bp46867 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content70% 
IMG OID 
ProductATPase associated with various cellular activities AAA_5 
Protein accessionYP_003289343 
Protein GI268315624 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAAA CGCCCACCAC ATATCGCCCG CGCGAGGGAC GCGCCTGGCT CTGGGCCATC 
CCGCCCCAGC ACTACCCGGC CTTTCTGCAG ACGGGCACCT TTGCCGTGCA CCGGGTGGGC
CGGGCCGCGC TCCATCGCCT GCGTCCGGGC GATCGGATCT TCGCCTACCT GTCGGGCTCC
AAGGTGCTCG TGGGAATGTT CGAGGTAACG GGCGAGCCCT TCGAAGACCA CACGCCGCTG
GTGCCGGGCG TGGCCTATCC GCACCGCGTG CGCGTGCGGC CGCTGGTGGT GCTCTCCGAA
GAAGCCTGGG TGCCGTTCGA GGCGTTCGCC GACAAGCTGG AGGTCGTGCG CAACTATCCC
GACTTTCGGT CGGTCGTGCA ACAGGTGCTG CACCCGCTTC CGCGCGTGGA CGAAAAAGTG
CTGGAGTTTC TGATCCGGGC GCGGGCGGCC GACCTGGAGC GGGCCATGTC GGCCCTGGAA
GAATTGCGCC GGCTCAGGGC CGAGCGACCG GCACCGGTCG TGCGCGAGCG GCGCGTCCGC
TACCGCGCCG AAGCGTTCGA CCGGGCCGCC GCGCTCGAAA CGCTCCTGGG TTACCTGGAA
GGCCGGGGAT TCGTCTATGC GCCCTGGATC GTGGCGGCCT ACGTGGCGGC CGTGCGCACC
AAACCGCTGG TCATCCTGGC GGGACCTACC GGCACGGGCA AGTCGAAGCT CCCGCTGCTG
GTGGCTGAGG CGACCGGCAG CGCGGCCCAG CTCATCCCCG TGCGCCCCGA CTGGGCCGAC
AGCGCCGAAC TGCTGGGCTA CGTGGACCTG CAGGGCCGCT TCCGTCCCGG CACGCTGCTT
CGCCTCATGC GCGAGGCACA GCAGCAACCC GATCGGTTCT TTGTGGGTGT GCTGGACGAG
ATGAATCTGG CGCGACCGGA GCAGTACCTG GCCGAAGCGC TCAGCCGCAT TGAAGATCGT
CGCCCGCTTC CTGAAGGCGG CTGGACCACC GAACCCCTGC TGCAACTGTC GCTCGCTCCG
GCCGATCAGG GCTGGGCCCG CGTGGCCTGG ACGGCCAACT TCGCGCTGGT GGGCACGGTG
AACGTGGACG AAACCACCCA CGGCTTCAGT CGCAAGGTGA TCGACCGCGC CTTCACGCTG
GAGCTGACGG AGATCGACCT GGCGGCCACG CCCGCTTCCT CGGCGGTCGA GCCCGAGCCC
TGGCCGGTGA CGGCCTGGTG GCCCCGCGCG CTGCGCCTGG CCGAGCTACC GACGCCATCC
GACGCGGAGC GCCGGCAACT GGACCGCGTG CTGGAAACGC TCCAGACGCT CAACCGATGG
CTGCAGCCCG CCGGCTTCCC GGTGGCCTAC CGCACGCGCG ACGAGGTGGC GCTGTTCGTG
CTCCACGCCG CCGAAATGCC CGAAGCGTTC CGAACGCGCA CCGGCGAACC GGTCGATCCG
CTGGACCTGG CGTTCTGGAT GAAGGTGCTC CCCCGCCTGC AGGGCAGCTC GCCCCCGCTA
CGCCGGGCCC TCCGGGCCCT GCTGGGCTGG GCCGTCACCG GCGCCCCGAC CGAACGCGAC
GACGAACTGC GCGCGCTGCT CGACACCTGG ACGGCGGCGG GCTACCCGGA CCGCTGGCCG
GAAGCCGCCT TTCCCATGAC GGCCGCCCGC CTGGCGCACA TGTGGCTTCG GCTCGAAAGC
GAAGGCTTCG CTTCGTTCTG GGAGTGA
 
Protein sequence
MAETPTTYRP REGRAWLWAI PPQHYPAFLQ TGTFAVHRVG RAALHRLRPG DRIFAYLSGS 
KVLVGMFEVT GEPFEDHTPL VPGVAYPHRV RVRPLVVLSE EAWVPFEAFA DKLEVVRNYP
DFRSVVQQVL HPLPRVDEKV LEFLIRARAA DLERAMSALE ELRRLRAERP APVVRERRVR
YRAEAFDRAA ALETLLGYLE GRGFVYAPWI VAAYVAAVRT KPLVILAGPT GTGKSKLPLL
VAEATGSAAQ LIPVRPDWAD SAELLGYVDL QGRFRPGTLL RLMREAQQQP DRFFVGVLDE
MNLARPEQYL AEALSRIEDR RPLPEGGWTT EPLLQLSLAP ADQGWARVAW TANFALVGTV
NVDETTHGFS RKVIDRAFTL ELTEIDLAAT PASSAVEPEP WPVTAWWPRA LRLAELPTPS
DAERRQLDRV LETLQTLNRW LQPAGFPVAY RTRDEVALFV LHAAEMPEAF RTRTGEPVDP
LDLAFWMKVL PRLQGSSPPL RRALRALLGW AVTGAPTERD DELRALLDTW TAAGYPDRWP
EAAFPMTAAR LAHMWLRLES EGFASFWE