| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rmar_0002 |
|---|
| Symbol | |
|---|
| ID | 8566622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodothermus marinus DSM 4252 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013501 |
|---|
| Strand | + |
|---|
| Start bp | 1734 |
|---|
| End bp | 2873 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | DNA polymerase III, beta subunit |
|---|
| Protein accession | YP_003289299 |
|---|
| Protein GI | 268315580 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTTTA CCGTATCCAG CAACGACCTG CTGAAGGCCC TGACGGCGGT GGCCGGTGTG
GTCCCTTCGA AGGCCACCAT GCCCATTCTG GAGTGCATTC TGTTCGAGGC GGAAGACGGT
GCGCTCCGGC TGAGCGCGAC GGATCTGGAG ATTTCGATCG TGGAGCGGCT CCCGATTCAA
CTGGAGCTGC AGAACGGCAA GGAAGGGGCG CGCCGCGTGG CCGTGCCGGC CCGTCGGCTG
CTGGAGACGC TCCGGGCATT GCCCGATCTG CCGGTGCAGT TCAGCGCCGA CGAGTCGTTC
AACGTGACGC TGACCACCGA CCAGGGGCAC TACAAGATGG TGGGCTTCGA CGGGGCCGAC
TATCCGGCGT TGCCCGAGCT GGACGAGGCC CACAGCCTGA CCGTCGATGC CGCGCTGTTG
CGCCGGGCCA TCCAGAAGAC GGCTTTCGCC GTCAGCAAAG ACACGCTGCG CCCGGCCATG
ATGGGCATCT TCTTCCAGGT GCAGCCCGAA GAGGGGCGCG TGGTGGCCAC CGACGGCCAC
CGGCTGGTAC GTCTCCGCCT GCGCGAGCTG GTCAGCGAGA CGCCCCTGGA ATTTATCGTC
CCGGAAAAGG CCACGTCGCT GGTGGCCAAA CTGGCCGCCC AGCTCGACGG CACCTGCACG
ATCCGCGTGG ACGAGCGCCA CGTGGCCTTC GAGATGGGGC CGGTGCGCAT CATCAGCCGC
CTGATCGATG AGGTCTATCC CAACTACGAG GCGGTGATTC CCGTCGAAAA CGACCGGCGG
CTGGTGGTGG ACCGGGACGC CTTCCTGTCG GCCGTCAAGC GCGTGGGCCT GTATGCCTCC
AGCACGACCA ACCAGGTGCG ACTGACGCTC GAGCCGGACC ATGTGGAGAT TGCGGCCGAG
GATATCGAGC GGGCCAGCGA AGCCTACGAG CGCGTGCCCT GCGCCTACGA CGGCGAGCCC
ATGGTGATCG GATTCAATGC GGGCTATCTG ACCGAAGTGC TGGGCAATGT GGATTCCGAC
GAGGTCGTGC TGGAATTCAG CTCACCCAAC CGGGCCGGCG TGGTCATGCC GCACGAGCAG
GCCGAAGGCG AGGACCTGCT CATGCTCATC ATGCCGGTTA TGCTGAACAC CTACGCCTGA
|
|---|
| Protein sequence | MRFTVSSNDL LKALTAVAGV VPSKATMPIL ECILFEAEDG ALRLSATDLE ISIVERLPIQ
LELQNGKEGA RRVAVPARRL LETLRALPDL PVQFSADESF NVTLTTDQGH YKMVGFDGAD
YPALPELDEA HSLTVDAALL RRAIQKTAFA VSKDTLRPAM MGIFFQVQPE EGRVVATDGH
RLVRLRLREL VSETPLEFIV PEKATSLVAK LAAQLDGTCT IRVDERHVAF EMGPVRIISR
LIDEVYPNYE AVIPVENDRR LVVDRDAFLS AVKRVGLYAS STTNQVRLTL EPDHVEIAAE
DIERASEAYE RVPCAYDGEP MVIGFNAGYL TEVLGNVDSD EVVLEFSSPN RAGVVMPHEQ
AEGEDLLMLI MPVMLNTYA
|
|---|
| |