| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001585 |
|---|
| Symbol | |
|---|
| ID | 8559898 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 1798798 |
|---|
| End bp | 1799892 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 646409253 |
|---|
| Product | branched-chain alpha-keto acid dehydrogenase E1 component alpha subunit |
|---|
| Protein accession | YP_003288731 |
|---|
| Protein GI | 262396878 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit |
|---|
| TIGRFAM ID | [TIGR03181] pyruvate dehydrogenase E1 component, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGTTC AGGCATTACC CATGCATCGG TTTATCGACC ATCATGGGGA CCTAGTCGGC
CAACTACCCA ACTGGGCTGA CACTGAAACT TTGGTCGGGT TTTACCGAGA CATGGTATTA
ACTCGCACTT ACGACAACAA AGCCGTTGCG TTGCAACGCA CCGGCAAGTT AGGGACCTAC
CCTTCGCACC TAGGTGCTGA AGCCATCGGC ATTGCGGTCG GCAGAGCGCT GAAAGCCGAT
GATGTATTTG TCCCTTATTA TCGCGATATG CCTGCAATGT GGTGTCGTGG TATTGGCATG
GAGAAGAATC TTCAATACTG GGGCGGTGAT GAGCGCGGTA GTGATTTTGC TCCTGAGGGC
AGCCCAATTC CTAGCCGAGA TCTTCCATTC TGTGTCCCCA TTGCGACGCA ATGTACGCAC
GCTGTCGGGG TGGCTTCCGC ACTGAAAATT CAAGGTAACC ATGAAGCTGC GCTAGTCATG
TGCGGCGATG GCGGTACATC CAAAGGGGAT TTTCTAGAGT CAATAAACTG TGCGGGAGCT
TGGAATATTC CACTTGTTTT CGTTGTGAAT AACAACCAGT GGGCAATTTC AGTGCCGCGT
AGCCTTCAAT GTGCTGCCGA TTTCTTATCA GAAAAAGCGC AAGGCGCTGG TATACCGGGC
ATTACAGTAG ATGGTAACGA TGTCGTCGCG GTTTATGATG CAACCAAGAC CGCACTTGAG
AGAGCGAGAA AAGGGAAAGG CGCAACACTC ATCGAAGCGG TCAGTTACCG ATTAAGTGAC
CACACTACGG CCGATGATGC GACTCGTTAT CGTAAAGAGG ACGATGTTCA AACCGCATGG
CAATACGAAC CTATAGCACG TCTTAAAACG TATCTCCTTA ATCAAGGAGC TTGGAGCGAT
GAACAAGAGC AGCAATGGCT AGAATACTGC AAGGAACAAG TGGAACTGGC AGTTGAACGC
TACCTCAGCT TACCGTCACA AGCACCAGAA ACTGGGTTCG ATTATTTGTA TGAATCGCTT
CCCCAAGAGC TTCACGCTCA AAGAGATGAG CTCATCAACA AAGCAATGCG AATGCAGGGA
GGCAAACATG GCTGA
|
|---|
| Protein sequence | MNVQALPMHR FIDHHGDLVG QLPNWADTET LVGFYRDMVL TRTYDNKAVA LQRTGKLGTY
PSHLGAEAIG IAVGRALKAD DVFVPYYRDM PAMWCRGIGM EKNLQYWGGD ERGSDFAPEG
SPIPSRDLPF CVPIATQCTH AVGVASALKI QGNHEAALVM CGDGGTSKGD FLESINCAGA
WNIPLVFVVN NNQWAISVPR SLQCAADFLS EKAQGAGIPG ITVDGNDVVA VYDATKTALE
RARKGKGATL IEAVSYRLSD HTTADDATRY RKEDDVQTAW QYEPIARLKT YLLNQGAWSD
EQEQQWLEYC KEQVELAVER YLSLPSQAPE TGFDYLYESL PQELHAQRDE LINKAMRMQG
GKHG
|
|---|
| |