| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001510 |
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| Symbol | |
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| ID | 8559822 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1705130 |
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| End bp | 1706602 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646409179 |
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| Product | Rtn protein |
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| Protein accession | YP_003288658 |
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| Protein GI | 262396805 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTGAATA AGGCGCTTTT TAAAAAAGCC ATCATTTTTT TGTTGCCCAT TCCTTTGATT
GTTGGCGAAG TCTTGTATTT AGCTCGTGAA AGCGTGCAAA ACAACCTCAA CCATCTATTA
GAAAAAAACG TTCAAATCGC AGACGAAATT TTATTCCAAA TAGAGACCGA AAACCGCACG
GCTTTGTTGC ATCCTAGACG ATGTGAAGAG CTTCAGCAAA ACTTGATGTT TGAACGAGAT
ATCGAAGAAA TGCTGATTGT AAAAAATGGG GTCATTACGT GTTCTTCTAA ACTGGGCGTA
ATTTCTAAGC CGTTAGCCGA GCACATTATA TTTCCCGAGG GACAAGCGTT AGCACTTGGA
AACGTGGATA GCGTATATGA CCAATTTTTG CTCGTCGTGA CCGAAGGAGA GCACGGTTAT
CAAGCGGTGA CGATTATTGA TCATGACTAC TTTAATGCGA AGATAGGATT TAATAACGAT
TTACGCTTAA AACGCTCTGC CTTATTTATT CATGACCAAG TTGCACCTGA AGAAGCGTTG
AGAACGGGAA GTAATCCTAT TGGCATCAAA TCGTCGCAAA TGTTTGAGTA TGAAGCTTTG
AGTGAAGCTA GCGATCTATT CGTCAAACAG AGAACACTTT CCTATTTTTT GTATTCAATT
CCAATCATTT TTGTTATCTA TCTTTGCTTA TATGCGTTAA ATAAATTTAT CGATCCTCAT
CGAAGCTTGG TTCTGGATTT AAAGAAAGCC ATAAAGAAAG GCGAGTTGAC TCTGTATTAC
CAGCCCCAGA TTAACGTCGA TACTGGTCAA CTATTTGGTT TTGAAGCCCT AGTGCGATGG
GAACATCAGA ATAAAGGGTT CATTTCTCCT GATGAGTTTG TGCCAGCGGC GGAGCAAAGT
GGATTGGTCT TTCTGCTCAC GGATTACGTT CTCGATAAAG CGGCAGAAGA CTTTAGTAAA
TTAGACTTTA ATCAGTCTGT TCACCTTGGT ATTAATGTGC CGCCCGGTTA CTTAGTTGGG
CCAAACGCGA TTAGAAAGAT TCAACTCATT GATAGGAAGT TAAGTCAAAA TAACGTCTCA
TTAGGCATAG AGATAACAGA ACGTCAACTC ATTGATGCTG AAGCCAGAAA GTGCATCGCA
GCGCTGCGAG TACATGGAAT TGATGTGTTG ATCGACGATT TTGGTACCGG TCAAACCTCG
CTGGCGTTTC TGCAGCACAT GCGTATTGAT TACCTAAAAA TCGATAAATG TTTTGTCGAA
ACTATTGGTA TACCTAGCCT TAGTGCTTCC GTTTTAAAAG CTATTGTTCA CTTTGCGGAA
GAGCTAAAAG TACAACTCAT CGCTGAAGGT GTAGAAACAA CGGCGCAAGC CGACCATTTG
AAAAAGATGG GAGTGCGATA TCATCAAGGA TATTTTTACT CCAAGCCTTT ACCTTATGAT
CAACTTGCTC AGCGAAGTCA TTATGATTGG TAA
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| Protein sequence | MLNKALFKKA IIFLLPIPLI VGEVLYLARE SVQNNLNHLL EKNVQIADEI LFQIETENRT
ALLHPRRCEE LQQNLMFERD IEEMLIVKNG VITCSSKLGV ISKPLAEHII FPEGQALALG
NVDSVYDQFL LVVTEGEHGY QAVTIIDHDY FNAKIGFNND LRLKRSALFI HDQVAPEEAL
RTGSNPIGIK SSQMFEYEAL SEASDLFVKQ RTLSYFLYSI PIIFVIYLCL YALNKFIDPH
RSLVLDLKKA IKKGELTLYY QPQINVDTGQ LFGFEALVRW EHQNKGFISP DEFVPAAEQS
GLVFLLTDYV LDKAAEDFSK LDFNQSVHLG INVPPGYLVG PNAIRKIQLI DRKLSQNNVS
LGIEITERQL IDAEARKCIA ALRVHGIDVL IDDFGTGQTS LAFLQHMRID YLKIDKCFVE
TIGIPSLSAS VLKAIVHFAE ELKVQLIAEG VETTAQADHL KKMGVRYHQG YFYSKPLPYD
QLAQRSHYDW
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