Gene VEA_001473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001473 
Symbol 
ID8559785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand- 
Start bp1662178 
End bp1662828 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content44% 
IMG OID646409142 
Productsigma cross-reacting protein 27A 
Protein accessionYP_003288621 
Protein GI262396768 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG3155] Uncharacterized protein involved in an early stage of isoprenoid biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.799881 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TCGCAGTTAT CTTCAGTGGT TCAGGTGTTT ACGATGGCAC AGAACTGCAT 
GAAGCCGTAT TAGCACTCCA TGCCATTGAA AAAGAAGGTG CATCATGGCA TTGCTTTGCT 
CCTAACATCG ATCAATTACA CGTGATTAAT CATCTAACTG GCGAAGAGAT GGACGAAACA 
CGAAATGTGT TGGTGGAATC TGCACGTCTT GCACGTGGCA ATATTGATGA TGTTGCAAGA 
TTAAACCCAG AGGAGTTTGA TGCCCTACTC TTACCTGGCG GTTTTGGTGC CGCTAAAAAT 
CTCACTGACT TCGCAGTATC AGGAGCTGAG TGCTCGATTA ATACACACGT AGCTCAAGCA 
TGTCGCGCAT TCGCTCATGC GAAAAAGCCA GCAGGTTATC TGTGTATTTC ACCTGTCATT 
ATTCCGATGA TTTATGATCA AGGCGTGAAA GGCACCGTAG GCAACGATGA AGCGATCTCG 
ATAGCATTTA ATCAAATGGG CGGTGAGCAC ATCACTTGCT CTGTCGAGGA TATCGTTTTT 
GATGAAACAC ACCTCGTTCT ATCAACCCCA GCTTATATGT TGGCAGAGAA TATCTCTCAA 
GCGGCATCAG GTATCGAAAA GTTAGTATCA AAGCTGATTG AAATTGCCTA A
 
Protein sequence
MKKVAVIFSG SGVYDGTELH EAVLALHAIE KEGASWHCFA PNIDQLHVIN HLTGEEMDET 
RNVLVESARL ARGNIDDVAR LNPEEFDALL LPGGFGAAKN LTDFAVSGAE CSINTHVAQA 
CRAFAHAKKP AGYLCISPVI IPMIYDQGVK GTVGNDEAIS IAFNQMGGEH ITCSVEDIVF 
DETHLVLSTP AYMLAENISQ AASGIEKLVS KLIEIA