Gene VEA_001466 details

Gene Information

• Locus tag: VEA_001466
• ID: 8559778
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013457
• Strand: +
• Start bp: 1653816
• End bp: 1654532
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 646409135
• Product: ABC transporter ATP-binding protein
• Protein accession: YP_003288614
• Protein GI: 262396761
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGATTA AATTGGAAGG CTTATCCAAG ACGTACAACC CAAAGAGTGA CTTCCCGGTA 
CATGCGGTTC AGAGCGTAGA TTTGGAGATA AAGCAAGGTG AGTTTGTCGC TATTATGGGA 
CCTTCTGGTT CAGGGAAAAC GACGCTACTA AACATGTTGG GCGGGATTGA TTCGCCTACA 
TCAGGACGCG TGGAAATTGA TGGATGCTTA ATCTCTGATA TGTCAGAAAA AGAGTTGATC 
GCTTATCGGC GCGATAACAT TGGCTTTATC TTCCAAGATT ATAGCCTGCT CCCCGTACTG 
ACAGCTCTTG AAAACGTCGA GTTTGTTATG CAATTGCAAG GGAAAACAGA AAGGGAATGT 
CGTGAACGCG CCAGCGCGCT ATTGCAACAG GTTGGATTAT CACAGCAGAT GCATAAACGT 
CCGAGTAAAA TGTCTGGAGG CCAACAACAG AGAGTTGCGG TTGCAAGAGC ATTGGCACCA 
AAACCAAGGT TTGTAATGGC AGATGAGCCT ACCGCCAACT TAGATGCAAA AAGTACAGCC 
GAGCTGCTTG ATATCATGGA ACAACTCAGT GAAAAAGAAG GCACGACATT TATCTTTTCT 
ACCCATGATC CTAGAGTTAT TAAGCGCGCA CATCGAATCA TAGTATTTGA GGACGGGCGT 
TTGGCACGAG ATTTTGCCAA CATTGATAAC ACCATAGAGA AGAGCCATGC GTGGTAG 

 

Protein sequence

MTIKLEGLSK TYNPKSDFPV HAVQSVDLEI KQGEFVAIMG PSGSGKTTLL NMLGGIDSPT 
SGRVEIDGCL ISDMSEKELI AYRRDNIGFI FQDYSLLPVL TALENVEFVM QLQGKTEREC 
RERASALLQQ VGLSQQMHKR PSKMSGGQQQ RVAVARALAP KPRFVMADEP TANLDAKSTA 
ELLDIMEQLS EKEGTTFIFS THDPRVIKRA HRIIVFEDGR LARDFANIDN TIEKSHAW