| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001441 |
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| Symbol | |
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| ID | 8559753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1631929 |
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| End bp | 1632756 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646409110 |
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| Product | L-rhamnose operon transcriptional activator RhaR |
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| Protein accession | YP_003288589 |
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| Protein GI | 262396736 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGAAA AGAATAAGGA AATCGCTACC TTCAAGATAG CTCAAGAGCT CGGCGGTTTA
GAACTTCTCG ATGCAAAGTA TGAGAAGCAG AATTTTTCAC GCCATAGCCA CGAAGGTTAC
ACTATTGGCG TCATCGAGAA GGGAGCACAG CAGTTCTTTC GAACAGGCGG AAATCATATC
GCGCCACAGG ACAGCATCAT CCTTGTAAAT GCAGATGAAG TACACAACGG GCATTCGGCC
TCAGAAGGCG GTTGGGAATA CAAAGCAATG TACCCCGTAC CACAGCAGTT TCAGACCTTG
GGGCAAGAGC TTGGTTCACC AAATGTAGCT CTGCCCTATT TTCCTCAACC TGTGGTTTAC
GATCCTGAGC TGGCTAGTCA GTTGCGATTG GTGTTTGAAA CGCTAGAAAA ATCAGACAAC
CGACTACTAC GAGAAACTTT GATTTACGGC ACGTTGATCA AACTAGCCAG CAAACACAGC
ACCCACCGGG CACCGCTCAA AGAATCAACC AGAGCTCAGC GACAAATACA GTTGGTCAAA
GAGTTTTTGG AAGACTTCCC GCAAACGGAC GTCTCGCTAG AAGAGCTCGC AAAACTGGCT
GGGTTAAGCC CTTTTCATTT GCTAAGAGAG TTTCAAAAAC AGTTTGGCTT CCCTCCCCAT
GCTTATCAAA TTCAGCAACG TTTACGTATG GCGAAGAAGC TACTAAAAAT GGGACAAAAA
ATTTCAGATG TGGCACAAGA ATGTGGCTTC CATGATCAAA GCCATCTGCA TCGACACTTT
AAAAAAGCCA TGGGCGTCAC TCCCGGCCAA TACGTCCGTC ACAGCTAA
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| Protein sequence | MKEKNKEIAT FKIAQELGGL ELLDAKYEKQ NFSRHSHEGY TIGVIEKGAQ QFFRTGGNHI
APQDSIILVN ADEVHNGHSA SEGGWEYKAM YPVPQQFQTL GQELGSPNVA LPYFPQPVVY
DPELASQLRL VFETLEKSDN RLLRETLIYG TLIKLASKHS THRAPLKEST RAQRQIQLVK
EFLEDFPQTD VSLEELAKLA GLSPFHLLRE FQKQFGFPPH AYQIQQRLRM AKKLLKMGQK
ISDVAQECGF HDQSHLHRHF KKAMGVTPGQ YVRHS
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