| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001438 |
|---|
| Symbol | |
|---|
| ID | 8559750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | + |
|---|
| Start bp | 1630217 |
|---|
| End bp | 1630831 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 646409107 |
|---|
| Product | 2-keto-4-pentenoate hydratase |
|---|
| Protein accession | YP_003288586 |
|---|
| Protein GI | 262396733 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.301342 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGTTA TTCAAGTTGA AGAAAAGAAA GTAGAAGTGG GTAAAGTGCT TTGTGTTGGG
CGAAATTACG TTGAACATAT TCATGAGCTT GATAATGCGA TCCCTGAGCA AATGGTGGTA
TTTAATAAAC CCGCGACTTC CGTATCGACG ACTCTGCGTT CATTTCATCA AGAGCCTCTT
CATTACGAGG CTGAAATCTG TTTTCTGATC AAAGATGGAC GCTATTCAGC GGTCGGTTTG
GGATTGGATC TGACCAAGCG CGGTTTGCAG TCTTCACTTA AACAACAAGG GTTGCCCTGG
GAGCGTGCTA AAGCGTTTGA TGGCTCCGCA GTGTTTAGTC GATTTGTCTC TTTGGATAAC
ATTGATATTA ATGATCTTAA CCTAGAGCTC TTGATTAACT GCGTTCGTGT ACAAAAAGGT
CACGTTAACC AGATGCTCTA TCCGCCGCTA ACCATTTTGG ATGAATTAAC GAGTTACACA
ACACTTCAAG ATGGCGATGT GGTAATGACC GGCACACCAA AAGGAGTTGG TGAGGTGCAT
CAAGGTGACA TCTTCCTTGG ACGATTAAAG TGTGGTGATG TCACCTTGTT GGAGATTGAG
TGGGTGGCGA ATTAA
|
|---|
| Protein sequence | MSVIQVEEKK VEVGKVLCVG RNYVEHIHEL DNAIPEQMVV FNKPATSVST TLRSFHQEPL
HYEAEICFLI KDGRYSAVGL GLDLTKRGLQ SSLKQQGLPW ERAKAFDGSA VFSRFVSLDN
IDINDLNLEL LINCVRVQKG HVNQMLYPPL TILDELTSYT TLQDGDVVMT GTPKGVGEVH
QGDIFLGRLK CGDVTLLEIE WVAN
|
|---|
| |