| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001437 |
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| Symbol | |
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| ID | 8559749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1628937 |
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| End bp | 1629995 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646409106 |
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| Product | non-specific porin |
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| Protein accession | YP_003288585 |
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| Protein GI | 262396732 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.524484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAAA AATTATTAGC AGCGGCAATC GCAGCAGCAA CTTTCGGCAC TCAAGCAGTG
GCAGTGGAAC TTTATAATAA CGATGGCACA ACATTTTCGA TGGGCGGCCA CGTTTCTGTT
AACTTAAATG GTTCAGAGCA AGGTGACACG GATGTTGGTA CTAACTCTCC TCGTATCAAT
ATCTCTGCGA CACAAGATTT AGGCAATGGC TTCACCGCAG ACGCACGTGG TGAATGGGCT
CTAAACTACT TAGATGGCGG TGAAGAGTCG TTTAAAACTC GTCTAGGTTA CTTAGGTTTA
ACACATGAGG TTTACGGTCG TGCAGTAGGT GGTACGCAAT GGTCACCTTA CTATGATGTA
GCAGGCATCG CGGATATGCC AATTGCGTTT GCGAATGACT TCATTTACGA CGATCACGGA
AACCTAGGCA CAGGTCGTGC GGATAAAATG CTGTCTTATC GCAATGGCTT TGATTTAGGC
GAAGCAGGTG TGATTAACGT TGGTCTTGGA TGGCAAGGCG CAAATGATGA ATACACGCGT
AACGACGCAG GTACTATCAC TGGTGGTCTT AAATACGATG ACCGCATGCA AGTTGCACTT
TCTTACGCAA TCATAGGCGC GAAAATTGGC TACTCATACA ACGGTGGTGA CTTCCAACAC
CCTGCTTACA CAGGTAAACA CACCGCAGAA TCACATGTTG TGTCTGCATC TTACGGCGCT
TACGGCCAAG GTCTGTTCCT TGCCGCGGTA TATGGTTCAA ATGAAAATAT GAACTTCAGT
GTAAATGGCG ACCGTTTGGC GGAAAGTGAT GCGTACGAAG CGATCATCGC ATACGCTCTA
GCGAACAGCT TAAACTTGAG CGTTAACTAC GAGATGGTTG AAGGTAAAGA GTTCAAAAAT
TCTAAAACAG AAACCGCTCG TGAGGAAATG GCACTGCAGG CAGAGTACAA CTTCACGCCT
AAATTTGTTG GTTACGCGGG TTACCAGTTT GACCTAAATG ATGACCATGG TCGTGAAACT
GATGACAAAT GGGCGATAGG TGCTCGTTAC TACCTATAA
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| Protein sequence | MNKKLLAAAI AAATFGTQAV AVELYNNDGT TFSMGGHVSV NLNGSEQGDT DVGTNSPRIN
ISATQDLGNG FTADARGEWA LNYLDGGEES FKTRLGYLGL THEVYGRAVG GTQWSPYYDV
AGIADMPIAF ANDFIYDDHG NLGTGRADKM LSYRNGFDLG EAGVINVGLG WQGANDEYTR
NDAGTITGGL KYDDRMQVAL SYAIIGAKIG YSYNGGDFQH PAYTGKHTAE SHVVSASYGA
YGQGLFLAAV YGSNENMNFS VNGDRLAESD AYEAIIAYAL ANSLNLSVNY EMVEGKEFKN
SKTETAREEM ALQAEYNFTP KFVGYAGYQF DLNDDHGRET DDKWAIGARY YL
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