| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001436 |
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| Symbol | |
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| ID | 8559748 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1627356 |
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| End bp | 1628327 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646409105 |
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| Product | non-specific porin |
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| Protein accession | YP_003288584 |
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| Protein GI | 262396731 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.154506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGG CAGCACTAAC TACTGCAATT CTTACAGCAT TGGTATCAGC ACCATCATTC
GCAGCAACAG TATACAAAAA CGACGGTACT GAATTAAAAG TTGGCGGCCG CGTTGAGTTC
CGTGGTGACT TCATCGGTTC AGGTGGTGCT GAAGTTGAAG GCTCAATGGA AGATAAAAGC
CGCGCTCGTC TTAATCTAAA AGGTAAAACG GACATCGGCA ATGGCCTTTC TGCATTCGGT
GTTTACGAAG CCGAGCAAAA AACGGGCAAG AGTGAATTCA AAAACCGCTA CATGTATGCA
GGTGTCGACT CTGATATCGG TGCTTTCTCT GTAGGTCGTC AAGACATGGC TGCAGTCATC
ATCTCTGACA TGACGGATAT CACTGAGTTC TCTGGTGTTC AGCAAGTTAT CGATTCCTCT
TCTGATAAGC AAGACAGCGT TTTCGCATAC CGTGGTGCGT TTGATGCACT ACAACTACAA
GCAACCTACC AAGCAAACTC TAGTGATAAC GAAGATAAAT ACGGCATCTC TGGAATGTAC
TCACTGCCAA TGGGCCTAGA CCTCGGTCTT GCATATTCTG GTGGCGACGT AGATAAAGAC
AACTCTGAAG ATCAAGTTCT AGGTGGTATC GCTTACTCGA TGGATAACCT ATACCTAGCA
GGTACTTATT CTCAAGGGTC CCTGACTGAC GCTGAAGACT TTACGGCTTA CGAGCTAGTC
GCAAGTTACA AAGTAGCGAG CAAAGTGACA CTTGCTGCGC TATACACAGC TCAAGAGAAT
GATCCAGACA ACGGTTCAAA GTACGACACC GTTGAAGGTA TCGAGCTTGT TGGTTACTAC
AAACTAAACA GCAACTTCCG TACTTACCTG TCTTACTACA TCAACCAACT TGATGAAGCA
AAAGATGCAA CAACAGGTCT AGTAACAGAA GGCGAAGATA CACTGCGCCT AGGCGTACGT
TACGATTTCT AA
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| Protein sequence | MKKAALTTAI LTALVSAPSF AATVYKNDGT ELKVGGRVEF RGDFIGSGGA EVEGSMEDKS
RARLNLKGKT DIGNGLSAFG VYEAEQKTGK SEFKNRYMYA GVDSDIGAFS VGRQDMAAVI
ISDMTDITEF SGVQQVIDSS SDKQDSVFAY RGAFDALQLQ ATYQANSSDN EDKYGISGMY
SLPMGLDLGL AYSGGDVDKD NSEDQVLGGI AYSMDNLYLA GTYSQGSLTD AEDFTAYELV
ASYKVASKVT LAALYTAQEN DPDNGSKYDT VEGIELVGYY KLNSNFRTYL SYYINQLDEA
KDATTGLVTE GEDTLRLGVR YDF
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