| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001411 |
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| Symbol | |
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| ID | 8559723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | + |
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| Start bp | 1601466 |
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| End bp | 1603223 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646409080 |
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| Product | putative transport protein |
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| Protein accession | YP_003288559 |
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| Protein GI | 262396706 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4533] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTCTGATC TCAACTTATT TCGTTATTAC CAACGCTTGC TCTCTTTTGG TGTTGGTAAT
GAAGCAAAAA CCACGCTGCA AGAAATCGCC GATTTGTTGT TTACTTCGCC TCGTCATGCG
CGCAGTTTGC TGGCGCAGAT GCAAGAGATA GCGTGGTTAA GTTGGCGACC AAAACCGGGA
CGGAACCAGC GTTCAACATT GTTGTTAAAC GTTGAACTCA GCGCGCTAAA AGAAAGCCTT
GCACTAGAGC GAATCAAGCT TGGTAAGTAC GAGAAAGCGC TGTCGATTCT GGATGAAGAT
GAAGCTGCAT TTGGGCGACT CCTCAAAACA ACGTCGGGCG CATCGGTAAA AGAGGGGCGG
CTCAATATTC AGCTGACCTA CAAACGCATG TTCGAGCGTG TGGTTCCGCA TCAACTGCAG
CGAAGTAGTG AACGTTTTTT GCTTCGCCAA ATTTATTGTT GTTTGGTTTC GAGCGATTAC
AACGGACAGG TGCAGCCAGA GTTGGCTCAT CATTGGCGTT ATGATGACAG CTTGTACGAA
TGGACATTTT ATCTTCGTCC GGGTCTGACT TTTCATAATG GCAACCCAAT TGATGCTGAA
ACGGTTGTCA GTTTGTTCGC CAAATTAAGC TCTTTGGAAT ACTACGAAAA AGAGCTGGCG
CATGTTGCCA ACATAACGGC ACTTAATCCA TTGAAGGTTG TTTTTAAGCT TAACCGACCT
GACTTGGGTT TTGCTGGACT TATTTCTGGC GTGAAATATG GCATTCAGCC CGTGAGTCAG
GTGAACGTTG CGAACAACAA GTTGGTGGTG GGGAGTGGTC CATTTTCCGT CGTTGAGCAC
AGTGAAAACC GTTTGAAACT GCAAGCGTTT GATGGCTATT ACGCGTGTCG AGTATTAACG
GATTTTGTGA CGATATGGAT CGTCAACGAT GAACAGATGG AAAATCCATC GCTTGCCGCA
AACACATTGC AACCAGAACC TGATTCTGCT GATGACATGT GCAGCCACTA TATGTCGACG
CCAAACAGTG AAGTATCACC AGCGAGTAAA CGCAGTCGAA CGGAGGACGG TTGTTTGTTC
GCACTGTTTA ACCATCATGC GAAGCACGCT TTGTCTCAGG CCCAGCGCCG ATACATCAGT
GAATTGATTA AACCTGAACA GCTAGCTGAA GTGATGCGCA GTGAAAACAT TATATTTGGA
AGCATACCTG CTTATAACTT ATTGCCTAAC TGGAAACCGG TGTTGCGTCC ATTTGGAGAA
GCGGTCAAGT TGCCAAAGCT GATCACCATC GCAGGGTACA ATTACACGGC ACTACGCCGG
TGCGCGCGAG CGATTTCTTC GCGTTTAGAG CGTGCGGGCA GCCGAGTGGA GATCGTTATG
TACTCCTACC GAGAACTGAG CGAGAAAGCC AAAAACGGCA CGCTTGATGA GACTCTGGTT
GTCACCAATA TCAACTTGGA CGATAACCGT CATGCGTCTG CGTTTAGCAA CTTCTTTAGC
AATGCTGTGC TTTACCACAC TTTAGGGGCG CAAAATGCGG CGTGGTTGGA TGCTCAAATG
GAGAATGTCC GTGCATTCTC ACCGCTTGAA GATTACCTGA GCGCGTTAGA GCCGATTGCG
TCCACTTTGA TTAGCGAATA TTGGATTGCA CCGATGTTTC ACCATACTCA GACGCTACGT
TTTCAAGGGG TCTTGGAAGA TGTCGCACTC ACAAACTGGG GATGGCCAGA CATACGATCC
GTTTGGTCTG CGGACTGA
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| Protein sequence | MSDLNLFRYY QRLLSFGVGN EAKTTLQEIA DLLFTSPRHA RSLLAQMQEI AWLSWRPKPG
RNQRSTLLLN VELSALKESL ALERIKLGKY EKALSILDED EAAFGRLLKT TSGASVKEGR
LNIQLTYKRM FERVVPHQLQ RSSERFLLRQ IYCCLVSSDY NGQVQPELAH HWRYDDSLYE
WTFYLRPGLT FHNGNPIDAE TVVSLFAKLS SLEYYEKELA HVANITALNP LKVVFKLNRP
DLGFAGLISG VKYGIQPVSQ VNVANNKLVV GSGPFSVVEH SENRLKLQAF DGYYACRVLT
DFVTIWIVND EQMENPSLAA NTLQPEPDSA DDMCSHYMST PNSEVSPASK RSRTEDGCLF
ALFNHHAKHA LSQAQRRYIS ELIKPEQLAE VMRSENIIFG SIPAYNLLPN WKPVLRPFGE
AVKLPKLITI AGYNYTALRR CARAISSRLE RAGSRVEIVM YSYRELSEKA KNGTLDETLV
VTNINLDDNR HASAFSNFFS NAVLYHTLGA QNAAWLDAQM ENVRAFSPLE DYLSALEPIA
STLISEYWIA PMFHHTQTLR FQGVLEDVAL TNWGWPDIRS VWSAD
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