Gene VEA_001403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001403 
Symbol 
ID8559715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1593827 
End bp1594753 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content49% 
IMG OID646409072 
ProductABC-type multidrug transport system ATPase component 
Protein accessionYP_003288551 
Protein GI262396698 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGAGT ATGCAATTCA AGCTCAAAAT GTGGTCAAAA AGTTCGGCGA CTTTACTGCT 
ATCAATAACA TCACACTCAA CGTGCCCAAA GGCAGCATTT ACGGATTTTT GGGGCCAAAT
GGTTGTGGTA AGTCGACCAC CATTCGTGTG CTCACCGGCC TTCTCAGCCC AAGCGAAGGC
AGTGTGGATG TGCTTGGATT AGAAATCCCA AAACAATCCG AACAACTGCG GCTCAAAATT
GGCTACATGA CACAAAAGTT CTCGTTGTAC GACGACCTAT CCGTTCAAGA GAACCTTGAA
TTTATTGGGC AAATTTTTGG TTTAAACAGC AAGTCGCTGA AAGAGCGGAT AGAAGAGCAG
CTCACCACTT ACGGGTTGGA TCAATTGCGC AAACAGCGCG TAAGCGGCAT GAGTGGCGGA
CAAAAGCAGC GCCTTTCACT CGCCGCGGCG ACCATGCACA AACCCGAACT GCTATTTTTG
GATGAGCCGA CATCCGCCGT TGACCCCGAA AATCGACGCG ATTTTTGGGA GCAGTTGTTC
GACTTGTGCG ATCAAGGTAC GACGATTTTG GTCACCACCC ATTACATGGA CGAAGCGGAA
CGCTGCCACC GTCTGGCAAT CATGGAATCA GGCGAAATTC GTGCCGATGG TGAACCCGAA
CGGTTAATGG AACAAATGGG CGTTAATATC ATTGAGGTGA AAGCCGACAA ACTTCGTGAA
CTTAAAGAAA AGCTGATTCA ACGTGACGAA GTTCGCTCTG CGGCGCAGTT GGGGATTCGT
TTACGCATCC TTATCCACCA GCATGTCGAG CAGCCGATTG AATGGTTAAA GCAGACGTTT
CCTGAACTTC AAAACGCTGA AATGAATCAC GCTCGCCCAA GCTTAGAAGA TGTTTTTGTC
AGCGTGACAG GGAAAGGCCG CCAATGA
 
Protein sequence
MTEYAIQAQN VVKKFGDFTA INNITLNVPK GSIYGFLGPN GCGKSTTIRV LTGLLSPSEG 
SVDVLGLEIP KQSEQLRLKI GYMTQKFSLY DDLSVQENLE FIGQIFGLNS KSLKERIEEQ
LTTYGLDQLR KQRVSGMSGG QKQRLSLAAA TMHKPELLFL DEPTSAVDPE NRRDFWEQLF
DLCDQGTTIL VTTHYMDEAE RCHRLAIMES GEIRADGEPE RLMEQMGVNI IEVKADKLRE
LKEKLIQRDE VRSAAQLGIR LRILIHQHVE QPIEWLKQTF PELQNAEMNH ARPSLEDVFV
SVTGKGRQ