| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001319 |
|---|
| Symbol | |
|---|
| ID | 8559631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013457 |
|---|
| Strand | - |
|---|
| Start bp | 1502367 |
|---|
| End bp | 1503200 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 646408988 |
|---|
| Product | capsular polysaccharide synthesis enzyme cpsE |
|---|
| Protein accession | YP_003288467 |
|---|
| Protein GI | 262396614 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.201605 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTATT CAATCTCTCG ACAATTTGAA AAGAACCGAG AACTCCAAGC TGACAATTTT
GTTTTAGTTT ACCAAATGGG CAAAGTTGGC TCATCGTCAA TTGAGCACAC GCTGGGAGAA
AGAAATATCC CGAGCTATCA CATCCACACC TTTGATGATC ACGAAGAATT TCACATGTAT
CACAATAAAA AAGACGTGAG TAAATTTTTC GATTTCAAAA ACCGTGCGCT CTACCGCTTA
GTACTCAAGC AACGAAAACG TATCTTACAA AAACGCGAAC AGATCAAAAT CGTCACACTG
GTCCGCGATC CAATCGCAAC AGTCTTTTCT CGTTTCTTTC AAGACCTCCA TTTGCAATTT
ATCGAAGGCA AAAAGAATGA TGCAATTCAC CGAGATATGG CAGTCACGTA TCAGCACCTC
GAACATTGTT TCGATAACTA TATCAATCTC AACTATTTTG CGGACTGGTT CGACAACGAG
TTAAAACGTA ACTTCAATAT CGATGTGATG CGTCAAGAAT TGGACAACAC TCAACCTTTC
TTCACATTCA AGAACGAGCA AGCCAACGTC ATGCTAATCA AATGCGAAAA GCTCAGCTCT
CTCGATAAAG AAATTGGCGA GTTTCTCGGG CTGCAAGACT TCGTGCTGAA AAACAGCAAT
GAAGCGAAAA ACAAGTGGTA CTCCAATATC CACCAGCACT TTAAGCATCA CTACGACTTT
TCAAAGCTGT TCTATATGTA CGATCTTCCC TTATATCGCC ACGTTTATTC AGAACAAGAA
CGTGATGCTT TCAAGCATAA ATGGATGCAG ACAGCAGGAA CAAAATCATC ATGA
|
|---|
| Protein sequence | MKYSISRQFE KNRELQADNF VLVYQMGKVG SSSIEHTLGE RNIPSYHIHT FDDHEEFHMY
HNKKDVSKFF DFKNRALYRL VLKQRKRILQ KREQIKIVTL VRDPIATVFS RFFQDLHLQF
IEGKKNDAIH RDMAVTYQHL EHCFDNYINL NYFADWFDNE LKRNFNIDVM RQELDNTQPF
FTFKNEQANV MLIKCEKLSS LDKEIGEFLG LQDFVLKNSN EAKNKWYSNI HQHFKHHYDF
SKLFYMYDLP LYRHVYSEQE RDAFKHKWMQ TAGTKSS
|
|---|
| |