Gene VEA_001216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001216 
Symbol 
ID8559528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1376635 
End bp1377081 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content43% 
IMG OID646408885 
ProductCsuB 
Protein accessionYP_003288364 
Protein GI262396511 
COG category[S] Function unknown 
COG ID[COG5430] Uncharacterized secreted protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.801331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCAGCGA CCATTGATAC GGGGTGTCTG ATCAATGGTG CGCTGACAGA AGAGAGTAAC 
ACTCAAATTG GAACAATAGG AGAGTTAAAC TTTGGTGAAC ATTCAGCTAT TTATGCTGCG
GAAGTAGAAG GCAGCATCAC CTACAACGGT GGGCTTACGT TAAGTTGTAC TCCAGGCATA
GCCATGAATA TTAAGATTGA CGGTGGTTTG AACGCTTCGG TAGGGGTGCG CAAGCTGAAG
CACACAGAAC AGTCGAGTAC GGTGGATTAT TTATTATTTG AAGATGCAGA ACACTCTCAA
GTATTAGACA TTGATACCCC CTATTCTGCT GGAACTAATG AAGACCCTGA CAACATTCAG
GTGCCAATTT GGGCAAAGGC GATATTAAAT GGAAATGAAA TCGCTGGTAT TTATACAGAT
ACTCTTACCT TAACGCTTGA GTGGTAA
 
Protein sequence
MSATIDTGCL INGALTEESN TQIGTIGELN FGEHSAIYAA EVEGSITYNG GLTLSCTPGI 
AMNIKIDGGL NASVGVRKLK HTEQSSTVDY LLFEDAEHSQ VLDIDTPYSA GTNEDPDNIQ
VPIWAKAILN GNEIAGIYTD TLTLTLEW