Gene VEA_001212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001212 
Symbol 
ID8559524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1373364 
End bp1374557 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content48% 
IMG OID646408881 
Product2-amino-3-ketobutyrate coenzyme A ligase 
Protein accessionYP_003288360 
Protein GI262396507 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes 
TIGRFAM ID[TIGR00858] 8-amino-7-oxononanoate synthase
[TIGR01822] 2-amino-3-ketobutyrate coenzyme A ligase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTCTG CATTCTACCA ACAGATTCAG CAGCAAATTG AAGAAGTGAA GACTGAAGGT 
CTTTACAAAT CAGAGCGCGT AATCACGTCT CAGCAGCAAG CGGCTGTTAA AATCTCTACC
GGTGAAGAAG TATTAAACTT CTGTGCAAAC AACTACCTTG GTCTTGCTAA CCATCCTGCG
CTAATTGAAG CGGGTAAAGC GGGCATGGAC GAGCACGGCT TTGGTATGGC TTCAGTACGT
TTCATCTGTG GTACTCAAGA CATCCACAAA GAGCTTGAGC AGAAGTTGTC TAAGTTCCTA
GGTAAAGAAG ATACGATTCT TTACACCTCT TGCTTCGATG CAAACGCAGG TCTGTTTGAA
ACCATTCTCG GTAAAGAAGA CGCAATTATT TCAGACGCAC TAAACCACGC GTCAATCATC
GACGGTGTTC GTCTATGTAA AGCAATGCGT TTCCGTTACT CAAACAACAA CATGGAAGAG
CTAGAGCAAC AACTGATTGC TGCGAAAGAA GCAGGCGCAC GCCACATTCT TATCGTTACT
GACGGTGTGT TCTCAATGGA TGGCGTAGTG GCGAACCTTC CGGCTATTTG TGACCTAGCT
GAAAAATACG GCGCACTGAC CATGGTTGAT GACTCTCACG CGGTTGGCTT CATGGGTAAA
ACGGGTGCAG GTACGCACGA ATACCACAAC GTGGTTGACC GTATCGACAT TATTACAGGT
ACGCTAGGTA AAGCAATGGG TGGCGCTTCA GGCGGTTACA CGTCTGGTAA AGCGGAAGTG
ATCGACTGGC TACGTCAGCG TTCTCGTCCA TACCTATTCT CTAACTCTGT TGCACCAGCA
ATCGTAAGCG CTTCTATCCG AGTTCTAGAT CTACTAGAAG AGAGCGGTGA CCTACGTGAC
CGTCTATGGG AAAACGCAGC ACACTTCCGC GCACGTATGG AAGCTGCTGG TTTCACAATG
GGCGGCGCTG ACCATGCGAT CATTCCAATC ATGCTAGGTG ATGCGAAAGT GGCAGCAGAA
TTTGCTGAAC GAGCACTAGA GAAAGGCATC TACGTAATCG GCTTCTCATT CCCTGTGGTA
CCAAAAGGCC AAGCGCGTAT CCGTACTCAA ATGTCAGCAG CGCATTCTCG TGAGCAGCTA
GATCGTGCAA TTGATGCGTT CATCGAAGTT GGTAAGGACA TGGGTCTTAT TTAA
 
Protein sequence
MSSAFYQQIQ QQIEEVKTEG LYKSERVITS QQQAAVKIST GEEVLNFCAN NYLGLANHPA 
LIEAGKAGMD EHGFGMASVR FICGTQDIHK ELEQKLSKFL GKEDTILYTS CFDANAGLFE
TILGKEDAII SDALNHASII DGVRLCKAMR FRYSNNNMEE LEQQLIAAKE AGARHILIVT
DGVFSMDGVV ANLPAICDLA EKYGALTMVD DSHAVGFMGK TGAGTHEYHN VVDRIDIITG
TLGKAMGGAS GGYTSGKAEV IDWLRQRSRP YLFSNSVAPA IVSASIRVLD LLEESGDLRD
RLWENAAHFR ARMEAAGFTM GGADHAIIPI MLGDAKVAAE FAERALEKGI YVIGFSFPVV
PKGQARIRTQ MSAAHSREQL DRAIDAFIEV GKDMGLI