Gene VEA_001179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_001179 
Symbol 
ID8559492 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013457 
Strand
Start bp1345234 
End bp1345503 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content44% 
IMG OID646408850 
Productflagellar biosynthesis protein FliQ 
Protein accessionYP_003288329 
Protein GI262396476 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1987] Flagellar biosynthesis pathway, component FliQ 
TIGRFAM ID[TIGR01402] flagellar biosynthetic protein FliQ 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.824092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCCTG AACTAACCGT AACGTTATTT TCCGATGCAG TATGGCTGAT CATTTTGATG 
GTTGCGGTAC TGGTTGTTCC TGGCTTAATT GTCGGTTTGT GTATCGCCGT TTTCCAGGCC
GCCACACAAA TCAACGAGCA AACACTCAGC TTTTTACCAC GTTTGCTCGT TACGCTATTG
ATGGTGATTT TTGCGGGTCA TTGGATGCTC CGAAAAATCA TGGAACTGTT TGATTTCTTA
TTCCACAACA TACCGGGGAT GATTGGCTAA
 
Protein sequence
MTPELTVTLF SDAVWLIILM VAVLVVPGLI VGLCIAVFQA ATQINEQTLS FLPRLLVTLL 
MVIFAGHWML RKIMELFDFL FHNIPGMIG