| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_001132 |
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| Symbol | |
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| ID | 8559445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013457 |
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| Strand | - |
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| Start bp | 1298745 |
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| End bp | 1301402 |
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| Gene Length | 2658 bp |
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| Protein Length | 885 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646408803 |
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| Product | glycosyl hydrolase family 13 |
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| Protein accession | YP_003288282 |
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| Protein GI | 262396429 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTTGAAA CTCTACCTAA CCCAATGAAT AAAATAAAAA TACTTCCTTT AGCGATCGCT
CTTGCTCTTT CTGGCTGTGG AAGCGACGAA ACCACACCAA TCGATACAGG CAGCCACGTG
GCATCTCCTG ATTGGCAAGA TCAAATCATT TACTTCCTGA TGATCGACCG TTTTAACGAC
GGCGACAGCG CTCTTAATGA GCAAGGGCAA AACGAATTCG ATCCGACTTC GGATAAAAAA
TTCAGCGGCG GCGACCTCGT TGGTGTGAGT GATAAGTTAA GCTACATCGA AGATCTCGGT
GCCACATCGA TCTGGATTAC TCCGCCAGTT GCTAACCAAT GGTGGGATGC AGAGCAAAAC
TACGGCGGCT ACCACGGGTA CTGGGCGCGC GATTTCCAAA AAGTGGATAA ACACTTTGGT
GACATGGAAA GCTACCAAGC GTTAGCACGC GAAGTGCATG CGCGTAACAT GTTCTTAATT
CAGGACATCG TGACCAACCA TGTAGGCAAC TTCTTTACCT ACGATGATCC TTACAGTTAT
GATCCAAGCC TACCTTGCCA AGGCTTCCGT TTGATTAAAA ATGCACTACC CGCCGGGCAA
GAGCTGCCGT ACCCCCTCAA CATGAACGAG TGTAAAACAG ACGGCACAGG CAGCTACCAC
TGGACGCCAA CCATCACCGA CCACAACGAT CCGGTACAAG AAAAAACCTG GCAGCTCTCT
GATTTGGATG ACCTTAATAC GTCCGGTCCT GAAGTACGCG CTTATCTAAA AGAGAGCTAC
CGAAAATGGA TTCGCGAAGT CGGCGTCGAC GGATTCCGTA TCGATACGGT GAAGTTTGTT
GAACACGATT TCTGGAACGA TTTCCTACAC GCCGACGATG GTGTGATGAC GCAAGCGGTT
GATACCGGTC GTGACAACTT CCTCACTTTT GGTGAAGTAT TCGAAACATC TACGCCATAC
AACACCGAAG GCGAAGAGAA GATGCTGACT TACATCGGTG AAAGTGGCTC ACCGAAACAG
CTAACCTCGG TACTGAACTT CCCATTGCAA GCGACCATGA CGCGCGTATT TGCATCAGGA
CAACCGACCG ACTATTTACG TTTCCGTCTT GAGAAAATGA TGGAGATGTT CCCAAATCCA
TACATCATGC CGAACTTCAT TGATAATCAC GACATGCCGC GTTTTCTGTC GCAAGGTAGC
GTGAATGACA TGAAACAAGC ACTGATCACC ATGATGAGCG TGCCGGGTAT TCCTGTGATT
TACCAAGGTA CAGAACAGGC GATGTCAGCG GCGCGCGATG CGATGTTTGC TGGCGGCTAC
CGTGAAGACG GCGACTACGT AGACTCATTC GACCAAAACA GCGAGATGTA CTTGTTCATC
CAAGAGCTTG CTAAGTTACG TACCGAAAAC AAAGTCATGA CACGCGGCGA AATGAAAGTG
ATTGGCAGCG ATAAAGCCGG CGCCGGTGTG TTCGCTTTTA CCCGAACGTT GGATAACGAC
GAAGTCTTAG TGGTAATGAA CACATCGAAT TCCCCGATGT TGATGAACCA ACTCGATGTA
GAGCAAGCGG GCGGCACTGT TTTCCAACAA CAAATCATGT CGAACTGGGC AGACGCTCCG
GAGAAGCTAA TCGCAGATGA AAACGGTCAC GTAACCCTTG AGCTACCAGC CAAATCTGCC
GTGATTTACT CGAAAACTAA CGACACCCAA TCGGTAGATA CACCAGACCT CAACATCCAA
CTAGCGCAGG ATTGGGAAGG GCAAACCATC ACAGATGACA TCGTGATTGC TGGTACTGCT
AACGCCAACG AGAAGTTGAA CCTCGTCATC GATGGTAACT TGGAAACAGC GCAAACCATT
ACTGTAGGCG CTGATGGTCA GTTTAGCGTC ACGCTGTCGA CTCGTCATTT TGCGATTGGC
GAGCAACAGC ACCGCTTCGC GATTTATTCC ACCGAGAAAA AAGCAGGCAT CGAGGACGTG
AGTTTTGTCT CGAACCTAAA CTGGTCAAAC ACGCCGGATG ACACCATTGA TGACGCAGGT
GATGCGCAAG ACGGCACTGG CGGTCCTAAC GGTAACTACT CATTACCAAC CGATCCAACG
TTCGACAAAG ACAACAGCCA ACTCGCAATC AACAAAGCAG AGGTGTTTAC CGTTGGCAGT
AACGTACGTT TGACCTTCAC CATGGACAAC ATCACCGACA CTTGGTTGCC ACCAAACGGC
TTCGACCACG TGGGTTTCAC CATCTTTATT GATTTACCTG AAGAAGCCGC AACTAACTTG
TCTGAGCTAC CGAAGATCAA CGCTTCTATG CCAAGCGGAA CCTGGAGTCG TAATGCGGTT
GTTTTTGGCT GGCAAAGCTC GATTTACAAA ACCAAAGGAG CAAATGCGAC GACATGGGGA
GAAGCGGTCA CGCCAGCACC AACAGTGACA GTAGACAAAG CCAATAACAC TATTTCGATG
GACTTTGCGA GTGACGCGCT GGGTCGACCT GATTCACTGG ATGGCATTCG ATTCTATGTG
ACGACTTGGG ACTTAGACGG CCTTTCGGCA ACTTACCGTC CGCTAGAACA AAACAAAGGC
CCTTGGAACT TCTCCGGTGG CGCATCGGAT GAAAGTAAGA TTTGGGACGA TTTACCAATC
ATCACCTTGT CGGAATAA
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| Protein sequence | MFETLPNPMN KIKILPLAIA LALSGCGSDE TTPIDTGSHV ASPDWQDQII YFLMIDRFND
GDSALNEQGQ NEFDPTSDKK FSGGDLVGVS DKLSYIEDLG ATSIWITPPV ANQWWDAEQN
YGGYHGYWAR DFQKVDKHFG DMESYQALAR EVHARNMFLI QDIVTNHVGN FFTYDDPYSY
DPSLPCQGFR LIKNALPAGQ ELPYPLNMNE CKTDGTGSYH WTPTITDHND PVQEKTWQLS
DLDDLNTSGP EVRAYLKESY RKWIREVGVD GFRIDTVKFV EHDFWNDFLH ADDGVMTQAV
DTGRDNFLTF GEVFETSTPY NTEGEEKMLT YIGESGSPKQ LTSVLNFPLQ ATMTRVFASG
QPTDYLRFRL EKMMEMFPNP YIMPNFIDNH DMPRFLSQGS VNDMKQALIT MMSVPGIPVI
YQGTEQAMSA ARDAMFAGGY REDGDYVDSF DQNSEMYLFI QELAKLRTEN KVMTRGEMKV
IGSDKAGAGV FAFTRTLDND EVLVVMNTSN SPMLMNQLDV EQAGGTVFQQ QIMSNWADAP
EKLIADENGH VTLELPAKSA VIYSKTNDTQ SVDTPDLNIQ LAQDWEGQTI TDDIVIAGTA
NANEKLNLVI DGNLETAQTI TVGADGQFSV TLSTRHFAIG EQQHRFAIYS TEKKAGIEDV
SFVSNLNWSN TPDDTIDDAG DAQDGTGGPN GNYSLPTDPT FDKDNSQLAI NKAEVFTVGS
NVRLTFTMDN ITDTWLPPNG FDHVGFTIFI DLPEEAATNL SELPKINASM PSGTWSRNAV
VFGWQSSIYK TKGANATTWG EAVTPAPTVT VDKANNTISM DFASDALGRP DSLDGIRFYV
TTWDLDGLSA TYRPLEQNKG PWNFSGGASD ESKIWDDLPI ITLSE
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