Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_001089 |
Symbol | |
ID | 8559402 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013457 |
Strand | - |
Start bp | 1241898 |
End bp | 1245887 |
Gene Length | 3990 bp |
Protein Length | 1329 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646408760 |
Product | putative pullulanase precursor |
Protein accession | YP_003288239 |
Protein GI | 262396386 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
TIGRFAM ID | [TIGR02103] alpha-1,6-glucosidases, pullulanase-type |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACAATA AGACATTTAA ATTATCAACA ATTGCCAAAA CCGTACTGCC TTTGATTTCC GTCGCAGTCA TCAGCGGTTG TGGTAGTGAT AGCACGAACG AAGATACGAC GAACCCAGGC TCAGGCTTGT ACCCTGCGGG AGAGAACGAG GTCGTCATTT ATTACAAACG CGATGTGGCG TCCGCTTCAA CGGCCAGCGA CTACGAAGGT TGGGGCTTGC ACCTGTGGAA CGGTGAAGGC TGTACCAGCA CAGATTTAGA CGCAATGGGC ATTCCTGGCA CAGGAACGGA TTGGTCGGCA CCGCATCCAT TCGATGGCAT CAACGACACC TACGGTGCTT ACTACGTACT GAAAGTGAAC CCAGATGCCT CTGACCCACA CGAATGCATG AACTTCATTC TGCACAAAGG TGATGAGAAA GCATTCGGCA GTGCAAACTC AAAAGTGGAG CTGACGAAAA TCGGCGAATC TAAAGGGTTG TTTGGCTTCC ACGGCAGCAG TGAGCTTTAC TACGAGCCAA TCGAAGAACG CCCTGTTGAT ATTGATGGTC AAAAAGCGCA TTGGCTAGAT GCCAACACCA TCGCGTGGGA AGCGGTGGCC AATGCGGATT CCATGAAGCT GTTCTACAGC CTCAGCAACG ACATTAAAAT GGATGAAGAC AAGCAAATCT CCGGTGGCAC GGCGGTTGAG TTGACGAAAG CAGGTGATTT ATCTGATGGT CTGAAATCAC GCTTCCGTCA CCTTGCTAGC CTCCAAGCTG CAGGCATTGA TGTCGATGAC GCGACTCTAC GCACGATCCT GAAATCACAA ATCGTTATGG TAGCTTACAA CGCAAATGGT GACGTCATTT CTGCAACTGA AGTGCAAAAG CCGGGCGTTC TCGATGCAGT ATTTGCCGAT TCCAAGGCAG GTAACGCGAT TGGTCAAGAA CTCGGCGCAA TTGTGGAAGG CGGTGCCGCA ACCTTCAAAC TATGGGCACC AACTGCCCAA GATGTTGATC TGATAATCTA CGATGAAAAC TTAGCAGAAG AAGCGACCGT TGCCATGACG GAAGACCCAG CAACAGGTAT CTGGGTTTCT GAGGCACAAA GCAACGTTGT CAACAAATAC TATCGCTACC AAGTTAAGGT ATACCACCCA ACAACTGGCG TCGTTGAAAC GCGTTTGGTA ACAGACCCAT ATTCAATGAG CTTGTCTAAA AACTCGCGAT ACTCGCAAGT GGTTGATTTA GATGATCCAA GCTTAATGCC TCAAGATTGG AAAAACTACG CACGCCCAAT GGTTAAAAAA GACGAAGACC ACGTCCTTTA CGAGTCACAC ATTCGTGATT TCAGCTTTAA CGACAGCAAA GGCACGCCAA GTCTTGATGG CAAATATCTT GCCCTTACAG AATCTGAGCG TGAGTCTGTT TCTCACTTAC AAGCCTTAAA AGATGCAGGC CTAACAACGC TGCATATCCT GCCAGCATTT GATATTGCAA CCGTGGATGA AGACGCTGAC CAGCGAGTCG ATATCACCGA CACCGTGGGT AAACTTTGTG GCATCAAGCC AGAAGCCTCC ATTTGTGAGA CCGAAGATGA CGGCAAAGTG ATTGAAGAGG TATTAAATAG CTACGACCCA ACAACGGGCA AAGCACAAGC GTTGATGAAC GATCTTCGCA TGCTAGACAG CTTCAACTGG GGTTACGACC CATACCACTA CACTGTACCA GAAGGCAGTT ATGCGACCGA TCCTAACGGT TCTAAACGTA TCCTTGAGTT CCGCGAAATG GTGCAAGCGA CGCATAAAAT GGATCTGAAA CTGGTCATGG ACGTGGTGTA CAACCACACG AATGCATCCG GTGTGAACGA AAAATCAGTA CTGGATAAAA TTGTCCCTGG GTACTACCAC CGCCTAAACG TCAACACTGG CGGCGTAGAA AACTCAACCT GTTGTGATAA CACCGCCACC GAAAACCTAA TGATGGGTAA ACTGATGGTT GACTCATTGA TGGTGTGGGC GGATGACTAT AAAGTCGATG GTTTCCGTTT TGACCTTATG GGCCACCAGC CGAAAGATGT CATGGTCTAC GCACTTGAAA AAGTCCGTGA AATTGATCCG AATACTTTGT TCTACGGCGA AGGCTGGGAC TTCGGTGAAG TTGCGCAAAA CGCTCGCTTC GATCAAGCGA CACAAGTCAA CATGGCGGGG ACAGAAATCG GTACTTTCTC TGATCGTCTG CGTGACGCAG TTCGTGGCGG AAGCCCGTTT GATGGTGGTG TAGATTCTGA AGGTAAGCAC CCACTTCGCT TCAACCAAGG CTTTGGTAAC GCCGCTTACC CGAACGAAGA AACTAAAACT GATGCAGAAT CTGTGAATGG CCGCCTACAC AACCAAGATC TGGTTCGTCT AGGTATGGCT GGTAACTTAG CTGACTACGT CCTTCTGGAT TACAAAGGCG AAACCAAACT TGGTAAGAAT GTTGATTACA ATGGTGCTCC AGCAGGCTAC ACAAAAGTGC CATCAGAGAA CATTTCCTAC GTGTCTAAGC ACGATAACCA AACGCTGTGG GACAACAACG CTTACAAGAT TGCGACAGGT ACTTCATCTG CTGAACGCGC ACGAATGCAG TCTGTATCAC TATCAACGGT GATGCTAGGT CAAGGTATTC CGTTCATTCA CATGGGTTCT GAGCTATTGC GCTCTAAGTC AATGCAGCGT GACTCGTACG ATTCTGGTGA CTGGTTCAAC CGTGTATTCT TCGATGGAAG CGACAATAAC TGGAACGTTG GTCTACCACG TGAAGACAAA GACGGTGCAA ACTGGGAGTT GATCAAAACC ATCGTCGGTG ACAGCACGGC GAAACCAGAC TCAACGGACA TCGAGCTGAC TAAGCAACAA TTCCTAGAGC TACTAAAAAT CCGCAGTACA AGCGAACTGT TCCGCTTAGA CACCGCGCAA GAAGTGATGA ACCGTGTTGA CTTCCGCAAC GTAGGGAAAG ACCAAGTGGA AGGCTTGATT GTGATGTCTA TCGACGATGG CACATCAGCA GGTGCCGATT TGGATTCGAA CTACGATGCG ATCGTGGCCG TTGTGAACTC AACATCAACT GAGAAATCTT TCAAAGTTGC TGGCGCTACT GGTTTCGAGC TGCATGAAGT TCAACAAAAC TCTGCGGATG ACATCGTGAA AGGTGCAAGC TTCGCCAATG AAACATTCAC AGTACCAGCA CTGACAACAG CGGTATTCGT ACAGCCACAA GACGGCGCGC AAGGTGCAGG CCTACCAGTA AACACGGATA ACAAAGACGT ATCGAGCATT CCTCCTTACG GCGAAACTGT GGTTTACGTC AAAGGCACCA TGAACGAGTG GTCAGATAGC AGTGACTGGG CGATGACCTT TATTGGCAAC GGCATGTACT CTGTAACTGG CGTTCTTGAA GCAGGTGAAC ACGAGTTCAA ATTTGCGGAC TCAGGATGGG CAAATCCAAA CATCGGTTGT GATGCTGCGG ATTTGGCTTC TGGCTCACTA GACTTAGGCT CTGCGGGGAA CTGTACGTTG TCTGTCGCTG AAACTGGTAA GTACAACTTC ACTCTGAACG CGTTACATGT GCAAGATGAA AGCGTAGAAA AACCTGTCGT TTCAGTGACC AAGTCAGCAG ATGCACCAAC GTTCGGTGAA AGAGCACTTT ACCTACGTGG CACTATCACC ACATGGGATA CGCCAGCGCA AGACTCAACT GCGAAGTTCA GCTATGTAGC AAATGACGTT TACTCGCTAG ACATTGACCT AGCGGCGGGC AACTACGAGA TGAAAGTGGC GAGCGCAGAC TGGGCAGCAG ACACCAACTT CGGTGGCGAA GGCAGTGTTG AGCTTGGTAA AGCGCTAACG ATGGAAGTCG GTGGCGGTAG TGCAAACCTG AAAATTGCGA TTGCAGAAGC AGGAAATTAC AACTTCCACT TCAACGCGGC TGACAAGTCG GCGCCAATCG TGACGGTAAC GAAAAACTAG
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Protein sequence | MDNKTFKLST IAKTVLPLIS VAVISGCGSD STNEDTTNPG SGLYPAGENE VVIYYKRDVA SASTASDYEG WGLHLWNGEG CTSTDLDAMG IPGTGTDWSA PHPFDGINDT YGAYYVLKVN PDASDPHECM NFILHKGDEK AFGSANSKVE LTKIGESKGL FGFHGSSELY YEPIEERPVD IDGQKAHWLD ANTIAWEAVA NADSMKLFYS LSNDIKMDED KQISGGTAVE LTKAGDLSDG LKSRFRHLAS LQAAGIDVDD ATLRTILKSQ IVMVAYNANG DVISATEVQK PGVLDAVFAD SKAGNAIGQE LGAIVEGGAA TFKLWAPTAQ DVDLIIYDEN LAEEATVAMT EDPATGIWVS EAQSNVVNKY YRYQVKVYHP TTGVVETRLV TDPYSMSLSK NSRYSQVVDL DDPSLMPQDW KNYARPMVKK DEDHVLYESH IRDFSFNDSK GTPSLDGKYL ALTESERESV SHLQALKDAG LTTLHILPAF DIATVDEDAD QRVDITDTVG KLCGIKPEAS ICETEDDGKV IEEVLNSYDP TTGKAQALMN DLRMLDSFNW GYDPYHYTVP EGSYATDPNG SKRILEFREM VQATHKMDLK LVMDVVYNHT NASGVNEKSV LDKIVPGYYH RLNVNTGGVE NSTCCDNTAT ENLMMGKLMV DSLMVWADDY KVDGFRFDLM GHQPKDVMVY ALEKVREIDP NTLFYGEGWD FGEVAQNARF DQATQVNMAG TEIGTFSDRL RDAVRGGSPF DGGVDSEGKH PLRFNQGFGN AAYPNEETKT DAESVNGRLH NQDLVRLGMA GNLADYVLLD YKGETKLGKN VDYNGAPAGY TKVPSENISY VSKHDNQTLW DNNAYKIATG TSSAERARMQ SVSLSTVMLG QGIPFIHMGS ELLRSKSMQR DSYDSGDWFN RVFFDGSDNN WNVGLPREDK DGANWELIKT IVGDSTAKPD STDIELTKQQ FLELLKIRST SELFRLDTAQ EVMNRVDFRN VGKDQVEGLI VMSIDDGTSA GADLDSNYDA IVAVVNSTST EKSFKVAGAT GFELHEVQQN SADDIVKGAS FANETFTVPA LTTAVFVQPQ DGAQGAGLPV NTDNKDVSSI PPYGETVVYV KGTMNEWSDS SDWAMTFIGN GMYSVTGVLE AGEHEFKFAD SGWANPNIGC DAADLASGSL DLGSAGNCTL SVAETGKYNF TLNALHVQDE SVEKPVVSVT KSADAPTFGE RALYLRGTIT TWDTPAQDST AKFSYVANDV YSLDIDLAAG NYEMKVASAD WAADTNFGGE GSVELGKALT MEVGGGSANL KIAIAEAGNY NFHFNAADKS APIVTVTKN
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